Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.88□□□□□ -2.11
RFC1P35251 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.88□□□□□ -2.11
RFC1P35251 MIR6079-201ENST00000635807 62 ntBASIC1.88□□□□□ -2.11
RFC1P35251 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
RFC1P35251 SNORA63D-201ENST00000364359 132 ntBASIC1.87□□□□□ -2.11
RFC1P35251 SNORA20.1-201ENST00000364790 130 ntBASIC1.87□□□□□ -2.11
RFC1P35251 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
RFC1P35251 U8.13-201ENST00000390842 128 ntBASIC1.87□□□□□ -2.11
RFC1P35251 MTCO2P33-201ENST00000402100 465 ntBASIC1.87□□□□□ -2.11
RFC1P35251 SNORA11.2-201ENST00000408318 127 ntBASIC1.87□□□□□ -2.11
RFC1P35251 RPL23AP63-201ENST00000498752 471 ntBASIC1.87□□□□□ -2.11
RFC1P35251 SNORD116-28-201ENST00000516123 91 ntBASIC1.87□□□□□ -2.11
RFC1P35251 RNU7-115P-201ENST00000516433 55 ntBASIC1.87□□□□□ -2.11
RFC1P35251 AC024405.2-202ENST00000532731 184 ntBASIC1.87□□□□□ -2.11
RFC1P35251 AP003357.1-201ENST00000604497 148 ntBASIC1.87□□□□□ -2.11
RFC1P35251 AC013791.1-201ENST00000616619 62 ntBASIC1.87□□□□□ -2.11
RFC1P35251 Y_RNA.65-201ENST00000362846 100 ntBASIC1.86□□□□□ -2.11
RFC1P35251 Y_RNA.489-201ENST00000384410 101 ntBASIC1.86□□□□□ -2.11
RFC1P35251 HSPE1P21-201ENST00000438283 308 ntBASIC1.86□□□□□ -2.11
RFC1P35251 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.86□□□□□ -2.11
RFC1P35251 RNU6-388P-201ENST00000517012 105 ntBASIC1.86□□□□□ -2.11
RFC1P35251 SNORA44.1-201ENST00000517031 108 ntBASIC1.86□□□□□ -2.11
RFC1P35251 RNU6-389P-201ENST00000517048 105 ntBASIC1.86□□□□□ -2.11
RFC1P35251 RNA5SP437-201ENST00000517249 129 ntBASIC1.86□□□□□ -2.11
RFC1P35251 AC005357.1-201ENST00000588399 301 ntBASIC1.86□□□□□ -2.11
RFC1P35251 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
RFC1P35251 AC078938.1-201ENST00000620993 318 ntBASIC1.86□□□□□ -2.11
RFC1P35251 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
RFC1P35251 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RFC1P35251 SNORD48-201ENST00000364953 64 ntBASIC1.85□□□□□ -2.11
RFC1P35251 Y_RNA.476-201ENST00000384347 108 ntBASIC1.85□□□□□ -2.11
RFC1P35251 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.85□□□□□ -2.11
RFC1P35251 MIR1261-201ENST00000408659 82 ntBASIC1.85□□□□□ -2.11
RFC1P35251 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.85□□□□□ -2.11
RFC1P35251 RNU6-1291P-201ENST00000516591 104 ntBASIC1.85□□□□□ -2.11
RFC1P35251 RNU6-1096P-201ENST00000517089 102 ntBASIC1.85□□□□□ -2.11
RFC1P35251 AC127455.1-201ENST00000565496 145 ntBASIC1.85□□□□□ -2.11
RFC1P35251 MIR5692C2-201ENST00000577959 77 ntBASIC1.85□□□□□ -2.11
RFC1P35251 POLR3GP1-201ENST00000594073 261 ntBASIC1.85□□□□□ -2.11
RFC1P35251 MIR548AY-201ENST00000617669 107 ntBASIC1.85□□□□□ -2.11
RFC1P35251 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
RFC1P35251 AC100821.1-201ENST00000523153 2479 ntBASIC1.84□□□□□ -2.11
RFC1P35251 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
RFC1P35251 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RFC1P35251 RNU6-899P-201ENST00000363947 107 ntBASIC1.84□□□□□ -2.11
RFC1P35251 RNU4-13P-201ENST00000364019 141 ntBASIC1.84□□□□□ -2.11
RFC1P35251 RNY1-201ENST00000364228 113 ntBASIC1.84□□□□□ -2.11
RFC1P35251 SNORA4.2-201ENST00000365313 147 ntBASIC1.84□□□□□ -2.11
RFC1P35251 Y_RNA.590-201ENST00000410140 107 ntBASIC1.84□□□□□ -2.11
RFC1P35251 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.84□□□□□ -2.11
RFC1P35251 snoU13.26-201ENST00000459452 105 ntBASIC1.84□□□□□ -2.11
RFC1P35251 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
RFC1P35251 SNORA31.10-201ENST00000516482 106 ntBASIC1.84□□□□□ -2.11
RFC1P35251 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
RFC1P35251 RNU6-341P-201ENST00000516973 96 ntBASIC1.84□□□□□ -2.11
RFC1P35251 MIR3198-2-201ENST00000577868 80 ntBASIC1.84□□□□□ -2.11
RFC1P35251 MIR3671-201ENST00000580455 88 ntBASIC1.84□□□□□ -2.11
RFC1P35251 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.84□□□□□ -2.11
RFC1P35251 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.84□□□□□ -2.11
RFC1P35251 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
RFC1P35251 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RFC1P35251 Y_RNA.292-201ENST00000364904 97 ntBASIC1.83□□□□□ -2.12
RFC1P35251 RNY4P28-201ENST00000365281 93 ntBASIC1.83□□□□□ -2.12
RFC1P35251 SNORA72-201ENST00000384339 132 ntBASIC1.83□□□□□ -2.12
RFC1P35251 MIR520G-201ENST00000385064 90 ntBASIC1.83□□□□□ -2.12
RFC1P35251 SNORA12.1-201ENST00000390873 148 ntBASIC1.83□□□□□ -2.12
RFC1P35251 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.83□□□□□ -2.12
RFC1P35251 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
RFC1P35251 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.83□□□□□ -2.12
RFC1P35251 Y_RNA.638-201ENST00000459374 113 ntBASIC1.83□□□□□ -2.12
RFC1P35251 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.83□□□□□ -2.12
RFC1P35251 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.83□□□□□ -2.12
RFC1P35251 AC011604.1-201ENST00000545978 196 ntBASIC1.83□□□□□ -2.12
RFC1P35251 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.83□□□□□ -2.12
RFC1P35251 AL929325.1-201ENST00000603096 117 ntBASIC1.83□□□□□ -2.12
RFC1P35251 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.83□□□□□ -2.12
RFC1P35251 MIR6845-201ENST00000613182 61 ntBASIC1.83□□□□□ -2.12
RFC1P35251 AL442067.1-201ENST00000613261 223 ntBASIC1.83□□□□□ -2.12
RFC1P35251 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.83□□□□□ -2.12
RFC1P35251 SNORA1B-201ENST00000362535 133 ntBASIC1.82□□□□□ -2.12
RFC1P35251 Y_RNA.267-201ENST00000364679 109 ntBASIC1.82□□□□□ -2.12
RFC1P35251 SNORA36B-201ENST00000410438 131 ntBASIC1.82□□□□□ -2.12
RFC1P35251 HSPE1P9-201ENST00000440046 311 ntBASIC1.82□□□□□ -2.12
RFC1P35251 Y_RNA.679-201ENST00000516416 91 ntBASIC1.82□□□□□ -2.12
RFC1P35251 RNU7-116P-201ENST00000516940 62 ntBASIC1.82□□□□□ -2.12
RFC1P35251 SNORA31.17-201ENST00000516953 127 ntBASIC1.82□□□□□ -2.12
RFC1P35251 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC1P35251 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.82□□□□□ -2.12
RFC1P35251 AC009779.6-201ENST00000603972 165 ntBASIC1.82□□□□□ -2.12
RFC1P35251 AC073349.3-201ENST00000617616 186 ntBASIC1.82□□□□□ -2.12
RFC1P35251 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
RFC1P35251 RNU6-653P-201ENST00000363074 106 ntBASIC1.81□□□□□ -2.12
RFC1P35251 RNU4-10P-201ENST00000364383 140 ntBASIC1.81□□□□□ -2.12
RFC1P35251 RNU6-1080P-201ENST00000383982 107 ntBASIC1.81□□□□□ -2.12
RFC1P35251 MIR520A-201ENST00000384862 85 ntBASIC1.81□□□□□ -2.12
RFC1P35251 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RFC1P35251 MIR934-201ENST00000401241 83 ntBASIC1.81□□□□□ -2.12
RFC1P35251 AC245047.3-201ENST00000429428 127 ntBASIC1.81□□□□□ -2.12
RFC1P35251 AC233266.1-201ENST00000454518 96 ntBASIC1.81□□□□□ -2.12
RFC1P35251 RNU7-94P-201ENST00000459576 63 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms