Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MIR3133-201ENST00000583157 78 ntBASIC2.31□□□□□ -2.04
CD40P25942 Pinc.1-201ENST00000616452 154 ntBASIC2.31□□□□□ -2.04
CD40P25942 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CD40P25942 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CD40P25942 RNU6-746P-201ENST00000384112 109 ntBASIC2.3□□□□□ -2.04
CD40P25942 RNA5SP482-201ENST00000391269 118 ntBASIC2.3□□□□□ -2.04
CD40P25942 SNORA11.2-201ENST00000408318 127 ntBASIC2.3□□□□□ -2.04
CD40P25942 RNU2-55P-201ENST00000411146 174 ntBASIC2.3□□□□□ -2.04
CD40P25942 AC055731.1-201ENST00000474387 401 ntBASIC2.3□□□□□ -2.04
CD40P25942 RPL23AP63-201ENST00000498752 471 ntBASIC2.3□□□□□ -2.04
CD40P25942 Y_RNA.714-201ENST00000517065 90 ntBASIC2.3□□□□□ -2.04
CD40P25942 RNA5SP437-201ENST00000517249 129 ntBASIC2.3□□□□□ -2.04
CD40P25942 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CD40P25942 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CD40P25942 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CD40P25942 MIR449A-201ENST00000362113 91 ntBASIC2.29□□□□□ -2.04
CD40P25942 RNU6-449P-201ENST00000383914 107 ntBASIC2.29□□□□□ -2.04
CD40P25942 RNU6-125P-201ENST00000384505 107 ntBASIC2.29□□□□□ -2.04
CD40P25942 Y_RNA.580-201ENST00000391004 95 ntBASIC2.29□□□□□ -2.04
CD40P25942 RNU2-70P-201ENST00000410718 179 ntBASIC2.29□□□□□ -2.04
CD40P25942 AL158823.1-201ENST00000418441 478 ntBASIC2.29□□□□□ -2.04
CD40P25942 MRPS17P9-201ENST00000511924 393 ntBASIC2.29□□□□□ -2.04
CD40P25942 RNU7-200P-201ENST00000516105 62 ntBASIC2.29□□□□□ -2.04
CD40P25942 RNU7-28P-201ENST00000516759 62 ntBASIC2.29□□□□□ -2.04
CD40P25942 Y_RNA.703-201ENST00000516846 111 ntBASIC2.29□□□□□ -2.04
CD40P25942 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.29□□□□□ -2.04
CD40P25942 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.29□□□□□ -2.04
CD40P25942 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.29□□□□□ -2.04
CD40P25942 RNU6-1138P-201ENST00000365359 106 ntBASIC2.28□□□□□ -2.04
CD40P25942 RNU6-296P-201ENST00000384608 107 ntBASIC2.28□□□□□ -2.04
CD40P25942 SNORD72-201ENST00000390994 80 ntBASIC2.28□□□□□ -2.04
CD40P25942 RN7SKP200-201ENST00000410564 320 ntBASIC2.28□□□□□ -2.04
CD40P25942 FTH1P12-201ENST00000432137 551 ntBASIC2.28□□□□□ -2.04
CD40P25942 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.28□□□□□ -2.04
CD40P25942 RNU6-346P-201ENST00000516288 111 ntBASIC2.28□□□□□ -2.04
CD40P25942 RNA5SP282-201ENST00000516355 108 ntBASIC2.28□□□□□ -2.04
CD40P25942 RNU6-197P-201ENST00000516680 100 ntBASIC2.28□□□□□ -2.04
CD40P25942 AC091544.4-201ENST00000555268 342 ntBASIC2.28□□□□□ -2.04
CD40P25942 MIR4635-201ENST00000583759 79 ntBASIC2.28□□□□□ -2.04
CD40P25942 AC008507.4-201ENST00000585464 127 ntBASIC2.28□□□□□ -2.04
CD40P25942 SNORA28-201ENST00000606769 126 ntBASIC2.28□□□□□ -2.04
CD40P25942 MTND1P7-201ENST00000632801 297 ntBASIC2.28□□□□□ -2.04
CD40P25942 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.05
CD40P25942 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CD40P25942 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CD40P25942 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CD40P25942 RNA5SP276-201ENST00000362580 94 ntBASIC2.27□□□□□ -2.05
CD40P25942 Y_RNA.91-201ENST00000363042 107 ntBASIC2.27□□□□□ -2.05
CD40P25942 RNA5SP68-201ENST00000363885 119 ntBASIC2.27□□□□□ -2.05
CD40P25942 Y_RNA.337-201ENST00000365312 102 ntBASIC2.27□□□□□ -2.05
CD40P25942 RNU6-187P-201ENST00000384139 106 ntBASIC2.27□□□□□ -2.05
CD40P25942 Y_RNA.486-201ENST00000384398 107 ntBASIC2.27□□□□□ -2.05
CD40P25942 Y_RNA.521-201ENST00000384560 114 ntBASIC2.27□□□□□ -2.05
CD40P25942 SNORD88.1-201ENST00000408684 91 ntBASIC2.27□□□□□ -2.05
CD40P25942 RNA5SP100-201ENST00000410903 110 ntBASIC2.27□□□□□ -2.05
CD40P25942 RNA5SP59-201ENST00000410922 110 ntBASIC2.27□□□□□ -2.05
CD40P25942 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.27□□□□□ -2.05
CD40P25942 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.27□□□□□ -2.05
CD40P25942 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.27□□□□□ -2.05
CD40P25942 MIR4662B-201ENST00000579498 81 ntBASIC2.27□□□□□ -2.05
CD40P25942 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.27□□□□□ -2.05
CD40P25942 MIR6817-201ENST00000615588 66 ntBASIC2.27□□□□□ -2.05
CD40P25942 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.27□□□□□ -2.05
CD40P25942 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.27□□□□□ -2.05
CD40P25942 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.27□□□□□ -2.05
CD40P25942 MIR3658-201ENST00000636291 56 ntBASIC2.27□□□□□ -2.05
CD40P25942 ICE2P2-201ENST00000483823 2787 ntBASIC2.27□□□□□ -2.05
CD40P25942 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CD40P25942 AC007336.1-201ENST00000576365 3828 ntBASIC2.26□□□□□ -2.05
CD40P25942 RNU6-1084P-201ENST00000362498 107 ntBASIC2.26□□□□□ -2.05
CD40P25942 RNU6-151P-201ENST00000364158 107 ntBASIC2.26□□□□□ -2.05
CD40P25942 U8.5-201ENST00000364528 136 ntBASIC2.26□□□□□ -2.05
CD40P25942 Y_RNA.634-201ENST00000364811 113 ntBASIC2.26□□□□□ -2.05
CD40P25942 SNORD50B-201ENST00000364995 70 ntBASIC2.26□□□□□ -2.05
CD40P25942 RNU6-950P-201ENST00000384651 107 ntBASIC2.26□□□□□ -2.05
CD40P25942 MIR802-201ENST00000390235 94 ntBASIC2.26□□□□□ -2.05
CD40P25942 RNU7-34P-201ENST00000459394 64 ntBASIC2.26□□□□□ -2.05
CD40P25942 RNU7-121P-201ENST00000516604 62 ntBASIC2.26□□□□□ -2.05
CD40P25942 MIR4762-201ENST00000585261 75 ntBASIC2.26□□□□□ -2.05
CD40P25942 AC087685.1-201ENST00000587507 141 ntBASIC2.26□□□□□ -2.05
CD40P25942 ZNF702P-202ENST00000434269 1966 ntBASIC2.26□□□□□ -2.05
CD40P25942 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
CD40P25942 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CD40P25942 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CD40P25942 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CD40P25942 Z82195.2-201ENST00000612348 18351 ntBASIC2.25□□□□□ -2.05
CD40P25942 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CD40P25942 RNU6-818P-201ENST00000364837 108 ntBASIC2.25□□□□□ -2.05
CD40P25942 RNY1P5-201ENST00000383890 115 ntBASIC2.25□□□□□ -2.05
CD40P25942 AL034345.1-201ENST00000407768 123 ntBASIC2.25□□□□□ -2.05
CD40P25942 RNA5SP57-201ENST00000459463 123 ntBASIC2.25□□□□□ -2.05
CD40P25942 RNA5SP153-201ENST00000516498 76 ntBASIC2.25□□□□□ -2.05
CD40P25942 SNORD116-25-201ENST00000516517 92 ntBASIC2.25□□□□□ -2.05
CD40P25942 RNA5SP148-201ENST00000516527 94 ntBASIC2.25□□□□□ -2.05
CD40P25942 MIR378D2-201ENST00000580636 98 ntBASIC2.25□□□□□ -2.05
CD40P25942 DNAJC19P2-201ENST00000593340 302 ntBASIC2.25□□□□□ -2.05
CD40P25942 AC078899.2-201ENST00000595282 212 ntBASIC2.25□□□□□ -2.05
CD40P25942 Y_RNA.778-201ENST00000620203 90 ntBASIC2.25□□□□□ -2.05
CD40P25942 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.25□□□□□ -2.05
CD40P25942 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms