Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RPL30P15-201ENST00000457129 321 ntBASIC1.05□□□□□ -2.24
BDNFP23560 RNU7-169P-201ENST00000459456 61 ntBASIC1.05□□□□□ -2.24
BDNFP23560 RPS26P48-201ENST00000491713 339 ntBASIC1.05□□□□□ -2.24
BDNFP23560 RNU6-559P-201ENST00000516151 98 ntBASIC1.05□□□□□ -2.24
BDNFP23560 ACA64.5-201ENST00000516207 127 ntBASIC1.05□□□□□ -2.24
BDNFP23560 RNU7-116P-201ENST00000516940 62 ntBASIC1.05□□□□□ -2.24
BDNFP23560 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
BDNFP23560 Y_RNA.101-201ENST00000363154 102 ntBASIC1.04□□□□□ -2.24
BDNFP23560 MIR522-201ENST00000385071 87 ntBASIC1.04□□□□□ -2.24
BDNFP23560 SNORA75.2-201ENST00000391138 150 ntBASIC1.04□□□□□ -2.24
BDNFP23560 SNORA75.3-201ENST00000391231 150 ntBASIC1.04□□□□□ -2.24
BDNFP23560 PDCL2P1-201ENST00000419302 352 ntBASIC1.04□□□□□ -2.24
BDNFP23560 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
BDNFP23560 SNORD45.4-201ENST00000516629 73 ntBASIC1.04□□□□□ -2.24
BDNFP23560 RN7SKP295-201ENST00000517264 153 ntBASIC1.04□□□□□ -2.24
BDNFP23560 AC136628.3-201ENST00000521868 290 ntBASIC1.04□□□□□ -2.24
BDNFP23560 MIR4659A-201ENST00000580269 81 ntBASIC1.04□□□□□ -2.24
BDNFP23560 MIR4653-201ENST00000585107 83 ntBASIC1.04□□□□□ -2.24
BDNFP23560 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
BDNFP23560 Y_RNA.224-201ENST00000364308 111 ntBASIC1.03□□□□□ -2.24
BDNFP23560 PSMC1P5-201ENST00000512850 177 ntBASIC1.03□□□□□ -2.24
BDNFP23560 RNA5SP255-201ENST00000516370 107 ntBASIC1.03□□□□□ -2.24
BDNFP23560 RNU6-113P-201ENST00000516653 101 ntBASIC1.03□□□□□ -2.24
BDNFP23560 SEPT14P17-201ENST00000617978 177 ntBASIC1.03□□□□□ -2.24
BDNFP23560 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
BDNFP23560 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
BDNFP23560 Y_RNA.330-201ENST00000365230 109 ntBASIC1.02□□□□□ -2.25
BDNFP23560 MIR520E-201ENST00000384867 87 ntBASIC1.02□□□□□ -2.25
BDNFP23560 AC098614.3-201ENST00000438957 440 ntBASIC1.02□□□□□ -2.25
BDNFP23560 AC005042.3-201ENST00000453230 174 ntBASIC1.02□□□□□ -2.25
BDNFP23560 RNU6-436P-201ENST00000516171 114 ntBASIC1.02□□□□□ -2.25
BDNFP23560 RNU6-197P-201ENST00000516680 100 ntBASIC1.02□□□□□ -2.25
BDNFP23560 MIR3192-201ENST00000584920 77 ntBASIC1.02□□□□□ -2.25
BDNFP23560 AC087685.1-201ENST00000587507 141 ntBASIC1.02□□□□□ -2.25
BDNFP23560 VN1R91P-201ENST00000594377 169 ntBASIC1.02□□□□□ -2.25
BDNFP23560 AC022441.3-201ENST00000605737 136 ntBASIC1.02□□□□□ -2.25
BDNFP23560 AL138825.1-201ENST00000618587 192 ntBASIC1.02□□□□□ -2.25
BDNFP23560 Y_RNA.384-201ENST00000383909 102 ntBASIC1.01□□□□□ -2.25
BDNFP23560 MIR516B2-201ENST00000385190 85 ntBASIC1.01□□□□□ -2.25
BDNFP23560 AC067940.1-201ENST00000458411 300 ntBASIC1.01□□□□□ -2.25
BDNFP23560 RNU11-2P-201ENST00000516898 142 ntBASIC1.01□□□□□ -2.25
BDNFP23560 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.01□□□□□ -2.25
BDNFP23560 AC055872.1-201ENST00000570978 278 ntBASIC1.01□□□□□ -2.25
BDNFP23560 AC025627.3-201ENST00000582078 182 ntBASIC1.01□□□□□ -2.25
BDNFP23560 RBM11P1-201ENST00000604951 799 ntBASIC1.01□□□□□ -2.25
BDNFP23560 AL136317.1-201ENST00000612653 226 ntBASIC1.01□□□□□ -2.25
BDNFP23560 Y_RNA.259-201ENST00000364619 101 ntBASIC1□□□□□ -2.25
BDNFP23560 RNU6-1067P-201ENST00000384752 107 ntBASIC1□□□□□ -2.25
BDNFP23560 MCFD2P1-201ENST00000417812 300 ntBASIC1□□□□□ -2.25
BDNFP23560 SNRPGP10-201ENST00000432323 225 ntBASIC1□□□□□ -2.25
BDNFP23560 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1□□□□□ -2.25
BDNFP23560 SNORD14E-201ENST00000364009 85 ntBASIC0.99□□□□□ -2.25
BDNFP23560 Y_RNA.242-201ENST00000364473 110 ntBASIC0.99□□□□□ -2.25
BDNFP23560 Y_RNA.269-201ENST00000364685 89 ntBASIC0.99□□□□□ -2.25
BDNFP23560 Y_RNA.370-201ENST00000365589 108 ntBASIC0.99□□□□□ -2.25
BDNFP23560 Y_RNA.387-201ENST00000383918 102 ntBASIC0.99□□□□□ -2.25
BDNFP23560 RNU6-1323P-201ENST00000384025 107 ntBASIC0.99□□□□□ -2.25
BDNFP23560 SNORD38C-201ENST00000384381 69 ntBASIC0.99□□□□□ -2.25
BDNFP23560 MIR518E-201ENST00000385252 88 ntBASIC0.99□□□□□ -2.25
BDNFP23560 MIR802-201ENST00000390235 94 ntBASIC0.99□□□□□ -2.25
BDNFP23560 RNU6-855P-201ENST00000410395 104 ntBASIC0.99□□□□□ -2.25
BDNFP23560 SNORA18.7-201ENST00000516910 131 ntBASIC0.99□□□□□ -2.25
BDNFP23560 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
BDNFP23560 MIR4764-201ENST00000580680 88 ntBASIC0.99□□□□□ -2.25
BDNFP23560 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
BDNFP23560 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
BDNFP23560 Y_RNA.619-201ENST00000410951 90 ntBASIC0.98□□□□□ -2.25
BDNFP23560 RPS29P1-201ENST00000465274 159 ntBASIC0.98□□□□□ -2.25
BDNFP23560 RNU6-120P-201ENST00000516077 103 ntBASIC0.98□□□□□ -2.25
BDNFP23560 RNU6-1007P-201ENST00000516586 107 ntBASIC0.98□□□□□ -2.25
BDNFP23560 JPX_2.1-201ENST00000614161 69 ntBASIC0.98□□□□□ -2.25
BDNFP23560 Y_RNA.116-201ENST00000363292 103 ntBASIC0.97□□□□□ -2.25
BDNFP23560 Y_RNA.146-201ENST00000363549 102 ntBASIC0.97□□□□□ -2.25
BDNFP23560 Y_RNA.428-201ENST00000384078 102 ntBASIC0.97□□□□□ -2.25
BDNFP23560 Y_RNA.456-201ENST00000384232 111 ntBASIC0.97□□□□□ -2.25
BDNFP23560 Y_RNA.508-201ENST00000384502 114 ntBASIC0.97□□□□□ -2.25
BDNFP23560 RNU6-110P-201ENST00000384508 104 ntBASIC0.97□□□□□ -2.25
BDNFP23560 U7.7-201ENST00000459276 60 ntBASIC0.97□□□□□ -2.25
BDNFP23560 Y_RNA.772-201ENST00000606692 102 ntBASIC0.97□□□□□ -2.25
BDNFP23560 HSBP1P2-201ENST00000299671 229 ntBASIC0.96□□□□□ -2.26
BDNFP23560 Y_RNA.796-201ENST00000364268 102 ntBASIC0.96□□□□□ -2.26
BDNFP23560 Y_RNA.799-201ENST00000364992 102 ntBASIC0.96□□□□□ -2.26
BDNFP23560 RNU6-1175P-201ENST00000365200 107 ntBASIC0.96□□□□□ -2.26
BDNFP23560 Y_RNA.341-201ENST00000365341 102 ntBASIC0.96□□□□□ -2.26
BDNFP23560 RNU6-1199P-201ENST00000411249 104 ntBASIC0.96□□□□□ -2.26
BDNFP23560 Y_RNA.713-201ENST00000517013 96 ntBASIC0.96□□□□□ -2.26
BDNFP23560 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
BDNFP23560 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
BDNFP23560 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.96□□□□□ -2.26
BDNFP23560 U6.92-201ENST00000636464 89 ntBASIC0.96□□□□□ -2.26
BDNFP23560 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.95□□□□□ -2.26
BDNFP23560 Y_RNA.329-201ENST00000365209 107 ntBASIC0.95□□□□□ -2.26
BDNFP23560 Y_RNA.462-201ENST00000384268 102 ntBASIC0.95□□□□□ -2.26
BDNFP23560 Y_RNA.474-201ENST00000384341 102 ntBASIC0.95□□□□□ -2.26
BDNFP23560 MTCO3P10-201ENST00000455912 772 ntBASIC0.95□□□□□ -2.26
BDNFP23560 SNORD123-201ENST00000459473 70 ntBASIC0.95□□□□□ -2.26
BDNFP23560 AC093027.1-201ENST00000546698 429 ntBASIC0.95□□□□□ -2.26
BDNFP23560 AC104465.1-201ENST00000611365 139 ntBASIC0.95□□□□□ -2.26
BDNFP23560 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
BDNFP23560 AC011476.5-201ENST00000615594 130 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms