Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 MIR190B-201ENST00000401119 79 ntBASIC-0.18□□□□□ -2.44
HIST1H1CP16403 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.18□□□□□ -2.44
HIST1H1CP16403 MTCO2P27-201ENST00000420740 428 ntBASIC-0.18□□□□□ -2.44
HIST1H1CP16403 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.18□□□□□ -2.44
HIST1H1CP16403 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.18□□□□□ -2.44
HIST1H1CP16403 SNORA40.9-201ENST00000515895 93 ntBASIC-0.18□□□□□ -2.44
HIST1H1CP16403 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.18□□□□□ -2.44
HIST1H1CP16403 MIR3678-201ENST00000578455 94 ntBASIC-0.18□□□□□ -2.44
HIST1H1CP16403 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.18□□□□□ -2.44
HIST1H1CP16403 Pinc.1-201ENST00000616452 154 ntBASIC-0.18□□□□□ -2.44
HIST1H1CP16403 uc_338.4-201ENST00000616635 176 ntBASIC-0.18□□□□□ -2.44
HIST1H1CP16403 MIR330-201ENST00000362196 94 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 SNORA9.1-201ENST00000362412 131 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 RNU6-879P-201ENST00000364328 108 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 SNORD116-11-201ENST00000383882 92 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 RNU6-306P-201ENST00000384617 107 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
HIST1H1CP16403 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.19□□□□□ -2.44
HIST1H1CP16403 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.19□□□□□ -2.44
HIST1H1CP16403 RNU7-66P-201ENST00000459469 62 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 HMGN1P10-201ENST00000474557 553 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 RNU2-12P-201ENST00000517216 168 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 AC141557.1-201ENST00000540982 400 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 MTND1P24-201ENST00000552175 861 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 AC011712.1-201ENST00000588959 234 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 AC010525.2-201ENST00000590920 195 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 MIR4791-201ENST00000607666 84 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 AC073114.1-201ENST00000612027 490 ntBASIC-0.19□□□□□ -2.44
HIST1H1CP16403 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.19□□□□□ -2.44
HIST1H1CP16403 SNORD114-5-201ENST00000362928 70 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 SNORD114-26-201ENST00000363543 72 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 RNA5SP63-201ENST00000391225 112 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 RNA5SP496-201ENST00000391240 109 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.2□□□□□ -2.44
HIST1H1CP16403 AL358176.2-201ENST00000425769 204 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 BTF3P11-201ENST00000426582 477 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.2□□□□□ -2.44
HIST1H1CP16403 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.2□□□□□ -2.44
HIST1H1CP16403 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.2□□□□□ -2.44
HIST1H1CP16403 RNU6-956P-201ENST00000458868 103 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 MIR5701-3-201ENST00000578890 82 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 MIR5701-1-201ENST00000585138 82 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 AC008608.1-201ENST00000603910 127 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 MIR5701-2-201ENST00000615634 82 ntBASIC-0.2□□□□□ -2.44
HIST1H1CP16403 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.21□□□□□ -2.44
HIST1H1CP16403 SNORA72-201ENST00000384339 132 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 MIR610-201ENST00000385139 96 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-747P-201ENST00000390928 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-241P-201ENST00000391148 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-447P-201ENST00000410293 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-355P-201ENST00000410427 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-791P-201ENST00000410467 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-705P-201ENST00000410601 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-860P-201ENST00000410860 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RNU6-785P-201ENST00000411324 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.21□□□□□ -2.44
HIST1H1CP16403 RPL23AP91-201ENST00000569211 455 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 MIR1273G-201ENST00000577677 100 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 AC005972.2-201ENST00000604690 348 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 U6.90-201ENST00000614007 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 U6.70-201ENST00000620287 104 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.21□□□□□ -2.44
HIST1H1CP16403 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 RNA5SP117-201ENST00000365294 118 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 RNU6-318P-201ENST00000384283 103 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 RNU6-364P-201ENST00000384387 107 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 RNU6-700P-201ENST00000391043 107 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 SNRPGP14-201ENST00000435400 219 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.22□□□□□ -2.44
HIST1H1CP16403 SEPT14P3-201ENST00000439401 183 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 AL732372.2-207ENST00000445840 183 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 SEPT14P2-201ENST00000453405 183 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
HIST1H1CP16403 RNU7-62P-201ENST00000458856 62 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 RNU7-102P-201ENST00000458948 62 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 RPL17P19-201ENST00000489069 552 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 SEPT14P4-201ENST00000513445 186 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 SCARNA8-201ENST00000515924 131 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 FO082796.1-201ENST00000523795 183 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.22□□□□□ -2.44
HIST1H1CP16403 AC087685.1-201ENST00000587507 141 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 MIR8087-201ENST00000612745 78 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 DISC2.1-201ENST00000612827 205 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 AC090517.2-201ENST00000614966 680 ntBASIC-0.22□□□□□ -2.44
HIST1H1CP16403 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.23□□□□□ -2.45
HIST1H1CP16403 SNORA36.1-201ENST00000363424 132 ntBASIC-0.23□□□□□ -2.45
HIST1H1CP16403 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.23□□□□□ -2.45
HIST1H1CP16403 SNORA63C-201ENST00000364578 129 ntBASIC-0.23□□□□□ -2.45
HIST1H1CP16403 SNORA1.2-201ENST00000365189 134 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms