Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SNORA69.1-201ENST00000390904 137 ntBASIC0.59□□□□□ -2.31
NCK1P16333 SNORA75.4-201ENST00000391278 119 ntBASIC0.59□□□□□ -2.31
NCK1P16333 SNORD111-201ENST00000408139 94 ntBASIC0.59□□□□□ -2.31
NCK1P16333 FCF1P4-201ENST00000448326 183 ntBASIC0.59□□□□□ -2.31
NCK1P16333 RN7SKP164-201ENST00000516138 266 ntBASIC0.59□□□□□ -2.31
NCK1P16333 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.59□□□□□ -2.31
NCK1P16333 RBM11P1-201ENST00000604951 799 ntBASIC0.59□□□□□ -2.31
NCK1P16333 MIR6835-201ENST00000621552 64 ntBASIC0.59□□□□□ -2.31
NCK1P16333 Y_RNA.253-201ENST00000364562 112 ntBASIC0.58□□□□□ -2.32
NCK1P16333 snoU2-30.1-201ENST00000365012 70 ntBASIC0.58□□□□□ -2.32
NCK1P16333 Y_RNA.370-201ENST00000365589 108 ntBASIC0.58□□□□□ -2.32
NCK1P16333 SNORA72-201ENST00000384339 132 ntBASIC0.58□□□□□ -2.32
NCK1P16333 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
NCK1P16333 Y_RNA.592-201ENST00000410274 109 ntBASIC0.58□□□□□ -2.32
NCK1P16333 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
NCK1P16333 Y_RNA.621-201ENST00000411065 96 ntBASIC0.58□□□□□ -2.32
NCK1P16333 RPS26P5-201ENST00000418544 335 ntBASIC0.58□□□□□ -2.32
NCK1P16333 MTND1P4-201ENST00000435196 415 ntBASIC0.58□□□□□ -2.32
NCK1P16333 AC011352.1-201ENST00000512300 793 ntBASIC0.58□□□□□ -2.32
NCK1P16333 SNORD45.4-201ENST00000516629 73 ntBASIC0.58□□□□□ -2.32
NCK1P16333 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
NCK1P16333 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
NCK1P16333 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.58□□□□□ -2.32
NCK1P16333 AC005972.2-201ENST00000604690 348 ntBASIC0.58□□□□□ -2.32
NCK1P16333 AC007742.2-201ENST00000618226 398 ntBASIC0.58□□□□□ -2.32
NCK1P16333 RNU6-961P-201ENST00000363893 105 ntBASIC0.57□□□□□ -2.32
NCK1P16333 RNU1-133P-201ENST00000364867 167 ntBASIC0.57□□□□□ -2.32
NCK1P16333 MIR605-201ENST00000385078 83 ntBASIC0.57□□□□□ -2.32
NCK1P16333 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
NCK1P16333 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.57□□□□□ -2.32
NCK1P16333 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.57□□□□□ -2.32
NCK1P16333 RNU7-41P-201ENST00000515917 61 ntBASIC0.57□□□□□ -2.32
NCK1P16333 RNU6-358P-201ENST00000516564 75 ntBASIC0.57□□□□□ -2.32
NCK1P16333 RNU7-4P-201ENST00000516961 62 ntBASIC0.57□□□□□ -2.32
NCK1P16333 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
NCK1P16333 AC060780.3-201ENST00000589464 80 ntBASIC0.57□□□□□ -2.32
NCK1P16333 AC087588.2-201ENST00000617667 426 ntBASIC0.57□□□□□ -2.32
NCK1P16333 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
NCK1P16333 Y_RNA.230-201ENST00000364348 109 ntBASIC0.56□□□□□ -2.32
NCK1P16333 Y_RNA.330-201ENST00000365230 109 ntBASIC0.56□□□□□ -2.32
NCK1P16333 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
NCK1P16333 Y_RNA.540-201ENST00000384638 111 ntBASIC0.56□□□□□ -2.32
NCK1P16333 RNU6-1067P-201ENST00000384752 107 ntBASIC0.56□□□□□ -2.32
NCK1P16333 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
NCK1P16333 AL392103.1-201ENST00000447000 198 ntBASIC0.56□□□□□ -2.32
NCK1P16333 CHEK2P4-201ENST00000450340 246 ntBASIC0.56□□□□□ -2.32
NCK1P16333 AC092989.1-201ENST00000481235 277 ntBASIC0.56□□□□□ -2.32
NCK1P16333 SNORA25.10-201ENST00000515926 124 ntBASIC0.56□□□□□ -2.32
NCK1P16333 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
NCK1P16333 AC087685.1-201ENST00000587507 141 ntBASIC0.56□□□□□ -2.32
NCK1P16333 MIR1244-1-201ENST00000612829 85 ntBASIC0.56□□□□□ -2.32
NCK1P16333 PVT1_3.1-201ENST00000620853 95 ntBASIC0.56□□□□□ -2.32
NCK1P16333 MIR1244-3-201ENST00000635744 85 ntBASIC0.56□□□□□ -2.32
NCK1P16333 MIR1244-2-201ENST00000636449 85 ntBASIC0.56□□□□□ -2.32
NCK1P16333 MIR1244-4-202ENST00000636813 85 ntBASIC0.56□□□□□ -2.32
NCK1P16333 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
NCK1P16333 Y_RNA.166-201ENST00000363730 102 ntBASIC0.55□□□□□ -2.32
NCK1P16333 RNU6-99P-201ENST00000364721 107 ntBASIC0.55□□□□□ -2.32
NCK1P16333 MIR216A-201ENST00000385063 110 ntBASIC0.55□□□□□ -2.32
NCK1P16333 RNU6-710P-201ENST00000410424 105 ntBASIC0.55□□□□□ -2.32
NCK1P16333 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.55□□□□□ -2.32
NCK1P16333 AC067940.1-201ENST00000458411 300 ntBASIC0.55□□□□□ -2.32
NCK1P16333 SNORD123-201ENST00000459473 70 ntBASIC0.55□□□□□ -2.32
NCK1P16333 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.55□□□□□ -2.32
NCK1P16333 RNU6-911P-201ENST00000516523 104 ntBASIC0.55□□□□□ -2.32
NCK1P16333 Y_RNA.691-201ENST00000516611 103 ntBASIC0.55□□□□□ -2.32
NCK1P16333 AC144568.1-201ENST00000520139 137 ntBASIC0.55□□□□□ -2.32
NCK1P16333 AC036111.3-201ENST00000526389 112 ntBASIC0.55□□□□□ -2.32
NCK1P16333 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
NCK1P16333 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
NCK1P16333 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
NCK1P16333 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.55□□□□□ -2.32
NCK1P16333 RNU6-1084P-201ENST00000362498 107 ntBASIC0.54□□□□□ -2.32
NCK1P16333 Y_RNA.101-201ENST00000363154 102 ntBASIC0.54□□□□□ -2.32
NCK1P16333 Y_RNA.393-201ENST00000383936 102 ntBASIC0.54□□□□□ -2.32
NCK1P16333 MIR516B2-201ENST00000385190 85 ntBASIC0.54□□□□□ -2.32
NCK1P16333 RNU6-131P-201ENST00000391144 107 ntBASIC0.54□□□□□ -2.32
NCK1P16333 SNORA75.6-201ENST00000391318 127 ntBASIC0.54□□□□□ -2.32
NCK1P16333 RNU6-1156P-201ENST00000410365 100 ntBASIC0.54□□□□□ -2.32
NCK1P16333 RNU6-1199P-201ENST00000411249 104 ntBASIC0.54□□□□□ -2.32
NCK1P16333 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
NCK1P16333 RNU6-264P-201ENST00000517134 104 ntBASIC0.54□□□□□ -2.32
NCK1P16333 AC055872.1-201ENST00000570978 278 ntBASIC0.54□□□□□ -2.32
NCK1P16333 RN7SL793P-201ENST00000583259 296 ntBASIC0.54□□□□□ -2.32
NCK1P16333 AC005176.2-201ENST00000596933 147 ntBASIC0.54□□□□□ -2.32
NCK1P16333 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
NCK1P16333 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
NCK1P16333 SNORD113.3-201ENST00000364630 78 ntBASIC0.53□□□□□ -2.32
NCK1P16333 Y_RNA.318-201ENST00000365131 97 ntBASIC0.53□□□□□ -2.32
NCK1P16333 RNU6-1323P-201ENST00000384025 107 ntBASIC0.53□□□□□ -2.32
NCK1P16333 SNORD78.2-201ENST00000391076 69 ntBASIC0.53□□□□□ -2.32
NCK1P16333 MIR548F1-201ENST00000408667 84 ntBASIC0.53□□□□□ -2.32
NCK1P16333 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.53□□□□□ -2.32
NCK1P16333 RNU6-436P-201ENST00000516171 114 ntBASIC0.53□□□□□ -2.32
NCK1P16333 RNU6-830P-201ENST00000516353 107 ntBASIC0.53□□□□□ -2.32
NCK1P16333 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
NCK1P16333 RNU6-1012P-201ENST00000516606 109 ntBASIC0.53□□□□□ -2.32
NCK1P16333 SNORA18.7-201ENST00000516910 131 ntBASIC0.53□□□□□ -2.32
NCK1P16333 RNU7-116P-201ENST00000516940 62 ntBASIC0.53□□□□□ -2.32
NCK1P16333 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms