Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
COL6A2P12110 RNU1-58P-201ENST00000362413 163 ntBASIC2.57□□□□□ -2
COL6A2P12110 SNORA33-201ENST00000363664 130 ntBASIC2.57□□□□□ -2
COL6A2P12110 RNU6-1080P-201ENST00000383982 107 ntBASIC2.57□□□□□ -2
COL6A2P12110 SNORD37.2-201ENST00000391075 66 ntBASIC2.57□□□□□ -2
COL6A2P12110 RNA5SP323-201ENST00000391094 133 ntBASIC2.57□□□□□ -2
COL6A2P12110 SNORA26-201ENST00000391286 122 ntBASIC2.57□□□□□ -2
COL6A2P12110 SNORA75.5-201ENST00000391291 81 ntBASIC2.57□□□□□ -2
COL6A2P12110 AC099677.2-201ENST00000436385 175 ntBASIC2.57□□□□□ -2
COL6A2P12110 AL135938.1-201ENST00000443141 297 ntBASIC2.57□□□□□ -2
COL6A2P12110 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
COL6A2P12110 OR9P1P-201ENST00000496431 281 ntBASIC2.57□□□□□ -2
COL6A2P12110 AL163195.1-201ENST00000496941 348 ntBASIC2.57□□□□□ -2
COL6A2P12110 SNORA31.11-201ENST00000516528 139 ntBASIC2.57□□□□□ -2
COL6A2P12110 RNU7-149P-201ENST00000516739 59 ntBASIC2.57□□□□□ -2
COL6A2P12110 RNA5SP137-201ENST00000516833 135 ntBASIC2.57□□□□□ -2
COL6A2P12110 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.57□□□□□ -2
COL6A2P12110 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
COL6A2P12110 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
COL6A2P12110 RNU6-23P-201ENST00000363283 107 ntBASIC2.56□□□□□ -2
COL6A2P12110 RNU6-978P-201ENST00000364371 103 ntBASIC2.56□□□□□ -2
COL6A2P12110 SNORA40-201ENST00000388090 126 ntBASIC2.56□□□□□ -2
COL6A2P12110 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.56□□□□□ -2
COL6A2P12110 AL109933.2-201ENST00000452651 260 ntBASIC2.56□□□□□ -2
COL6A2P12110 AC233266.1-201ENST00000454518 96 ntBASIC2.56□□□□□ -2
COL6A2P12110 RNA5SP367-201ENST00000516557 118 ntBASIC2.56□□□□□ -2
COL6A2P12110 RNU6-1291P-201ENST00000516591 104 ntBASIC2.56□□□□□ -2
COL6A2P12110 AP002004.2-201ENST00000531656 154 ntBASIC2.56□□□□□ -2
COL6A2P12110 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.56□□□□□ -2
COL6A2P12110 AC104984.5-201ENST00000586878 94 ntBASIC2.56□□□□□ -2
COL6A2P12110 AC005786.1-201ENST00000588553 154 ntBASIC2.56□□□□□ -2
COL6A2P12110 AL031274.2-201ENST00000599419 203 ntBASIC2.56□□□□□ -2
COL6A2P12110 AC242852.1-201ENST00000612151 96 ntBASIC2.56□□□□□ -2
COL6A2P12110 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.56□□□□□ -2
COL6A2P12110 AC244015.1-201ENST00000622301 99 ntBASIC2.56□□□□□ -2
COL6A2P12110 AC022513.1-201ENST00000624512 117 ntBASIC2.56□□□□□ -2
COL6A2P12110 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
COL6A2P12110 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
COL6A2P12110 Y_RNA.253-201ENST00000364562 112 ntBASIC2.55□□□□□ -2
COL6A2P12110 Y_RNA.634-201ENST00000364811 113 ntBASIC2.55□□□□□ -2
COL6A2P12110 Y_RNA.621-201ENST00000411065 96 ntBASIC2.55□□□□□ -2
COL6A2P12110 AC245047.4-201ENST00000433189 144 ntBASIC2.55□□□□□ -2
COL6A2P12110 AC092991.1-201ENST00000477176 376 ntBASIC2.55□□□□□ -2
COL6A2P12110 NDUFA4P2-201ENST00000489989 244 ntBASIC2.55□□□□□ -2
COL6A2P12110 SNORA25.12-201ENST00000516202 82 ntBASIC2.55□□□□□ -2
COL6A2P12110 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
COL6A2P12110 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
COL6A2P12110 AC120024.3-201ENST00000603167 156 ntBASIC2.55□□□□□ -2
COL6A2P12110 Pinc.1-201ENST00000616452 154 ntBASIC2.55□□□□□ -2
COL6A2P12110 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
COL6A2P12110 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.54□□□□□ -2
COL6A2P12110 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL6A2P12110 MIR449A-201ENST00000362113 91 ntBASIC2.54□□□□□ -2
COL6A2P12110 Y_RNA.251-201ENST00000364551 99 ntBASIC2.54□□□□□ -2
COL6A2P12110 Y_RNA.267-201ENST00000364679 109 ntBASIC2.54□□□□□ -2
COL6A2P12110 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
COL6A2P12110 RNU6-1081P-201ENST00000384537 107 ntBASIC2.54□□□□□ -2
COL6A2P12110 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.54□□□□□ -2
COL6A2P12110 MTND4LP9-201ENST00000427694 174 ntBASIC2.54□□□□□ -2
COL6A2P12110 SNRPGP10-201ENST00000432323 225 ntBASIC2.54□□□□□ -2
COL6A2P12110 RNA5SP272-201ENST00000516095 111 ntBASIC2.54□□□□□ -2
COL6A2P12110 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
COL6A2P12110 MIR548AI-201ENST00000579940 88 ntBASIC2.54□□□□□ -2
COL6A2P12110 AC087685.1-201ENST00000587507 141 ntBASIC2.54□□□□□ -2
COL6A2P12110 AC022202.1-201ENST00000613515 211 ntBASIC2.54□□□□□ -2
COL6A2P12110 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.54□□□□□ -2
COL6A2P12110 AP001340.1-201ENST00000624405 217 ntBASIC2.54□□□□□ -2
COL6A2P12110 AP006437.1-201ENST00000641440 3685 ntBASIC2.54□□□□□ -2
COL6A2P12110 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL6A2P12110 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
COL6A2P12110 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
COL6A2P12110 Y_RNA.242-201ENST00000364473 110 ntBASIC2.53□□□□□ -2
COL6A2P12110 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
COL6A2P12110 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
COL6A2P12110 RNU6-588P-201ENST00000410281 105 ntBASIC2.53□□□□□ -2
COL6A2P12110 RNU2-70P-201ENST00000410718 179 ntBASIC2.53□□□□□ -2
COL6A2P12110 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.53□□□□□ -2
COL6A2P12110 AL049830.1-201ENST00000468034 425 ntBASIC2.53□□□□□ -2
COL6A2P12110 ZNF658B-202ENST00000615961 3375 ntBASIC2.53□□□□□ -2
COL6A2P12110 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL6A2P12110 SNORA1B-201ENST00000362535 133 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 SNORA25.7-201ENST00000364375 127 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 RNU6-1082P-201ENST00000364574 107 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 RNU6-22P-201ENST00000384355 107 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 Y_RNA.486-201ENST00000384398 107 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.52□□□□□ -2.01
COL6A2P12110 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.52□□□□□ -2.01
COL6A2P12110 AC096725.1-201ENST00000514266 313 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 RN7SKP132-201ENST00000516001 208 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 RNU6-62P-201ENST00000516526 102 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 Y_RNA.714-201ENST00000517065 90 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.52□□□□□ -2.01
COL6A2P12110 ELOCP29-201ENST00000588193 334 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 MIR6715A-201ENST00000615929 79 ntBASIC2.52□□□□□ -2.01
COL6A2P12110 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COL6A2P12110 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL6A2P12110 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
COL6A2P12110 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL6A2P12110 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms