Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-355P-201ENST00000410427 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-791P-201ENST00000410467 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-705P-201ENST00000410601 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-860P-201ENST00000410860 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU6-785P-201ENST00000411324 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU7-62P-201ENST00000458856 62 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RNU7-102P-201ENST00000458948 62 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 RPL17P19-201ENST00000489069 552 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 Y_RNA.665-201ENST00000516177 98 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.38□□□□□ -2.47
TPM1P09493 U6.90-201ENST00000614007 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 U6.70-201ENST00000620287 104 ntBASIC-0.38□□□□□ -2.47
TPM1P09493 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.39□□□□□ -2.47
TPM1P09493 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.39□□□□□ -2.47
TPM1P09493 PCNPP3-201ENST00000393579 471 ntBASIC-0.39□□□□□ -2.47
TPM1P09493 RPL23AP54-201ENST00000495129 419 ntBASIC-0.39□□□□□ -2.47
TPM1P09493 SNORA18.4-201ENST00000516440 124 ntBASIC-0.39□□□□□ -2.47
TPM1P09493 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.39□□□□□ -2.47
TPM1P09493 RNY1P16-201ENST00000363063 111 ntBASIC-0.4□□□□□ -2.47
TPM1P09493 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.4□□□□□ -2.47
TPM1P09493 RNU6-879P-201ENST00000364328 108 ntBASIC-0.4□□□□□ -2.47
TPM1P09493 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.4□□□□□ -2.47
TPM1P09493 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.4□□□□□ -2.47
TPM1P09493 SNORA40.9-201ENST00000515895 93 ntBASIC-0.4□□□□□ -2.47
TPM1P09493 RNU6-256P-201ENST00000516747 97 ntBASIC-0.4□□□□□ -2.47
TPM1P09493 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.4□□□□□ -2.47
TPM1P09493 AC133485.4-201ENST00000561835 220 ntBASIC-0.4□□□□□ -2.47
TPM1P09493 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.4□□□□□ -2.47
TPM1P09493 MIR6755-201ENST00000619993 66 ntBASIC-0.4□□□□□ -2.47
TPM1P09493 AC098679.4-201ENST00000624241 654 ntBASIC-0.4□□□□□ -2.47
TPM1P09493 MIR145-201ENST00000384967 88 ntBASIC-0.41□□□□□ -2.48
TPM1P09493 MIR125B2-201ENST00000385128 89 ntBASIC-0.41□□□□□ -2.48
TPM1P09493 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.41□□□□□ -2.48
TPM1P09493 MTND3P7-201ENST00000474435 343 ntBASIC-0.41□□□□□ -2.48
TPM1P09493 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-0.41□□□□□ -2.48
TPM1P09493 SCARNA8-201ENST00000515924 131 ntBASIC-0.41□□□□□ -2.48
TPM1P09493 RN7SKP298-201ENST00000515950 94 ntBASIC-0.41□□□□□ -2.48
TPM1P09493 RNU2-12P-201ENST00000517216 168 ntBASIC-0.41□□□□□ -2.48
TPM1P09493 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.41□□□□□ -2.48
TPM1P09493 AC005972.2-201ENST00000604690 348 ntBASIC-0.41□□□□□ -2.48
TPM1P09493 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.41□□□□□ -2.48
TPM1P09493 AC068137.3-201ENST00000639191 341 ntBASIC-0.41□□□□□ -2.48
TPM1P09493 SNORA72.1-201ENST00000363485 129 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 SNORA63C-201ENST00000364578 129 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 Y_RNA.409-201ENST00000383990 98 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 SNORA75-201ENST00000384158 137 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 SNORA72-201ENST00000384339 132 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 RNU6-306P-201ENST00000384617 107 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 MIR190B-201ENST00000401119 79 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 AL158211.1-201ENST00000566763 763 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 SNORD92-201ENST00000585078 85 ntBASIC-0.42□□□□□ -2.48
TPM1P09493 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 SNORA1.2-201ENST00000365189 134 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 RNU6-442P-201ENST00000383968 104 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 RNU6-127P-201ENST00000390897 107 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 RNA5SP63-201ENST00000391225 112 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 MIR1287-201ENST00000408492 90 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.43□□□□□ -2.48
TPM1P09493 MIR18B-201ENST00000454574 71 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 RNU7-66P-201ENST00000459469 62 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 LRRC34P1-201ENST00000542742 915 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 MIR3672-201ENST00000584290 82 ntBASIC-0.43□□□□□ -2.48
TPM1P09493 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 RNU6-847P-201ENST00000411115 108 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 SNRPGP14-201ENST00000435400 219 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 snoU13.18-201ENST00000459483 104 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 RNU2-13P-201ENST00000515909 113 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 RNU7-181P-201ENST00000517234 74 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 MIR4743-201ENST00000584576 69 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 AC087685.1-201ENST00000587507 141 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 AC093424.1-201ENST00000604999 338 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 uc_338.6-201ENST00000613544 171 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 MIR1295B-201ENST00000636144 60 ntBASIC-0.44□□□□□ -2.48
TPM1P09493 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.45□□□□□ -2.48
TPM1P09493 RNU6-324P-201ENST00000363957 106 ntBASIC-0.45□□□□□ -2.48
TPM1P09493 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.45□□□□□ -2.48
TPM1P09493 AC005042.3-201ENST00000453230 174 ntBASIC-0.45□□□□□ -2.48
TPM1P09493 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.45□□□□□ -2.48
TPM1P09493 RNU6-448P-201ENST00000517052 107 ntBASIC-0.45□□□□□ -2.48
TPM1P09493 RNU7-156P-201ENST00000517214 74 ntBASIC-0.45□□□□□ -2.48
TPM1P09493 RNA5SP325-201ENST00000363756 130 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 MIR593-201ENST00000384856 100 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 MIR518E-201ENST00000385252 88 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 MIR643-201ENST00000385267 97 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 AL031003.1-201ENST00000404229 172 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 AC069271.1-201ENST00000445577 156 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 AC091959.1-201ENST00000495857 238 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 MIR5701-3-201ENST00000578890 82 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 RN7SL793P-201ENST00000583259 296 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 MIR5701-1-201ENST00000585138 82 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 MIR5701-2-201ENST00000615634 82 ntBASIC-0.46□□□□□ -2.48
TPM1P09493 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 SNORD116-11-201ENST00000383882 92 ntBASIC-0.47□□□□□ -2.48
TPM1P09493 MIR1257-201ENST00000408490 117 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms