Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC090142.3-201ENST00000519012 385 ntBASIC1.54□□□□□ -2.16
HMGB1P09429 AC068338.1-201ENST00000565567 176 ntBASIC1.54□□□□□ -2.16
HMGB1P09429 MIR4421-201ENST00000578133 69 ntBASIC1.54□□□□□ -2.16
HMGB1P09429 AL391903.3-201ENST00000612158 163 ntBASIC1.54□□□□□ -2.16
HMGB1P09429 Y_RNA.252-201ENST00000364556 101 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 SNORD50B-201ENST00000364995 70 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 SNORD114-24-201ENST00000365029 72 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 Y_RNA.330-201ENST00000365230 109 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 SNORD14.1-201ENST00000365609 90 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 Y_RNA.439-201ENST00000384119 94 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 Y_RNA.462-201ENST00000384268 102 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 RNU6-21P-201ENST00000384710 107 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 RNU4-30P-201ENST00000410245 143 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HMGB1P09429 RNU7-116P-201ENST00000516940 62 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 MIR3145-201ENST00000580727 82 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 MIR4423-201ENST00000580922 80 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 MIR4661-201ENST00000582720 75 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 MIR3660-201ENST00000584845 100 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 PRELID3BP2-201ENST00000605362 201 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 AC006157.1-201ENST00000611750 366 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 AC091925.1-201ENST00000623204 462 ntBASIC1.53□□□□□ -2.16
HMGB1P09429 RNU1-115P-201ENST00000365329 160 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 RNU6-937P-201ENST00000384325 106 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 SNORA40.6-201ENST00000391153 128 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 MIR942-201ENST00000401111 86 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 RNU4-62P-201ENST00000410125 130 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 AC015922.2-201ENST00000435593 184 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 HMGN2P32-201ENST00000444648 269 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 RNU7-90P-201ENST00000459216 62 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 RNU7-21P-201ENST00000459430 62 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 SNORA40.14-201ENST00000516543 86 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 SNORA74.3-201ENST00000517108 154 ntBASIC1.52□□□□□ -2.17
HMGB1P09429 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGB1P09429 Y_RNA.5-201ENST00000362334 102 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 Y_RNA.143-201ENST00000363520 106 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 RNU6-969P-201ENST00000383900 105 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 RNU6-1323P-201ENST00000384025 107 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 Y_RNA.456-201ENST00000384232 111 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 snoU13.25-201ENST00000458945 104 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 AC004223.1-201ENST00000479840 271 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 AC117454.1-201ENST00000491120 168 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 RPL23AP54-201ENST00000495129 419 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 MIR4298-201ENST00000584380 73 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 SNORD58B-201ENST00000607313 66 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 JPX_2.1-201ENST00000614161 69 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 Y_RNA.804-201ENST00000615262 101 ntBASIC1.51□□□□□ -2.17
HMGB1P09429 AL391516.1-201ENST00000554380 2449 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 SNORD81.1-201ENST00000363064 77 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 SNORA25.3-201ENST00000363205 127 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 Y_RNA.310-201ENST00000365063 113 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 AC117470.1-201ENST00000381974 330 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 MIR15B-201ENST00000385045 98 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 RNU7-95P-201ENST00000459222 64 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 U8.20-201ENST00000459445 131 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 PDCD5P2-201ENST00000507570 312 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 AC024405.2-202ENST00000532731 184 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 DNAJC19P9-201ENST00000555084 351 ntBASIC1.5□□□□□ -2.17
HMGB1P09429 MIR103A2-201ENST00000362154 78 ntBASIC1.49□□□□□ -2.17
HMGB1P09429 Y_RNA.368-201ENST00000365547 113 ntBASIC1.49□□□□□ -2.17
HMGB1P09429 Y_RNA.471-201ENST00000384312 102 ntBASIC1.49□□□□□ -2.17
HMGB1P09429 Y_RNA.526-201ENST00000384572 110 ntBASIC1.49□□□□□ -2.17
HMGB1P09429 MIR200A-201ENST00000384875 90 ntBASIC1.49□□□□□ -2.17
HMGB1P09429 MIR802-201ENST00000390235 94 ntBASIC1.49□□□□□ -2.17
HMGB1P09429 Y_RNA.579-201ENST00000390939 94 ntBASIC1.49□□□□□ -2.17
HMGB1P09429 AC009474.2-201ENST00000451383 136 ntBASIC1.49□□□□□ -2.17
HMGB1P09429 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.49□□□□□ -2.17
HMGB1P09429 MIR4795-201ENST00000584182 89 ntBASIC1.49□□□□□ -2.17
HMGB1P09429 RNA5SP264-201ENST00000363115 107 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 SNORD14E-201ENST00000364009 85 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 RNU6-482P-201ENST00000391068 107 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 AF228730.4-201ENST00000421457 183 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 AC108667.1-201ENST00000428618 249 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGB1P09429 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 RNU7-41P-201ENST00000515917 61 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGB1P09429 MIR4524B-201ENST00000581569 115 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 AC091812.1-201ENST00000432235 1948 ntBASIC1.48□□□□□ -2.17
HMGB1P09429 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGB1P09429 Y_RNA.203-201ENST00000364106 102 ntBASIC1.47□□□□□ -2.17
HMGB1P09429 Y_RNA.551-201ENST00000384661 102 ntBASIC1.47□□□□□ -2.17
HMGB1P09429 MTND3P22-201ENST00000510932 243 ntBASIC1.47□□□□□ -2.17
HMGB1P09429 ACA64.5-201ENST00000516207 127 ntBASIC1.47□□□□□ -2.17
HMGB1P09429 Y_RNA.713-201ENST00000517013 96 ntBASIC1.47□□□□□ -2.17
HMGB1P09429 MIR4764-201ENST00000580680 88 ntBASIC1.47□□□□□ -2.17
HMGB1P09429 MIR6715A-201ENST00000615929 79 ntBASIC1.47□□□□□ -2.17
HMGB1P09429 RNU4-73P-201ENST00000363164 141 ntBASIC1.46□□□□□ -2.18
HMGB1P09429 Y_RNA.315-201ENST00000365117 102 ntBASIC1.46□□□□□ -2.18
HMGB1P09429 AC104984.5-201ENST00000586878 94 ntBASIC1.46□□□□□ -2.18
HMGB1P09429 AP003357.1-201ENST00000604497 148 ntBASIC1.46□□□□□ -2.18
HMGB1P09429 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.46□□□□□ -2.18
HMGB1P09429 RNU4-50P-201ENST00000364361 141 ntBASIC1.45□□□□□ -2.18
HMGB1P09429 U8.7-201ENST00000364940 136 ntBASIC1.45□□□□□ -2.18
HMGB1P09429 RNY1P14-201ENST00000384426 108 ntBASIC1.45□□□□□ -2.18
HMGB1P09429 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.45□□□□□ -2.18
HMGB1P09429 AP1B1P2-201ENST00000416196 106 ntBASIC1.45□□□□□ -2.18
HMGB1P09429 SNORD123-201ENST00000459473 70 ntBASIC1.45□□□□□ -2.18
HMGB1P09429 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms