Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
SNRPAP09012 AC243829.6-201ENST00000612652 106 ntBASIC0.33□□□□□ -2.36
SNRPAP09012 AC015540.1-201ENST00000615828 501 ntBASIC0.33□□□□□ -2.36
SNRPAP09012 MIR6516-201ENST00000630554 81 ntBASIC0.33□□□□□ -2.36
SNRPAP09012 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.33□□□□□ -2.36
SNRPAP09012 Y_RNA.148-201ENST00000363557 117 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SNRPAP09012 SNORD116-2-201ENST00000384274 95 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 SNORD116-6-201ENST00000384711 96 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 MIR570-201ENST00000384917 97 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 MIR613-201ENST00000385248 95 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 AL031003.1-201ENST00000404229 172 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 MIR548F5-201ENST00000408421 86 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 MIR1827-201ENST00000408549 66 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 UBE2V1P7-201ENST00000446395 340 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 AC098826.2-201ENST00000452011 651 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 RPL30P15-201ENST00000457129 321 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 RNU6-329P-201ENST00000459618 107 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.32□□□□□ -2.36
SNRPAP09012 RNU7-43P-201ENST00000516554 64 ntBASIC0.32□□□□□ -2.36
SNRPAP09012 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.32□□□□□ -2.36
SNRPAP09012 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.32□□□□□ -2.36
SNRPAP09012 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.32□□□□□ -2.36
SNRPAP09012 SNORD114-23-201ENST00000363536 72 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 SNORD113.3-201ENST00000364630 78 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 Y_RNA.295-201ENST00000364918 102 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 SNORD50B-201ENST00000364995 70 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 Y_RNA.361-201ENST00000365515 120 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 Y_RNA.393-201ENST00000383936 102 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 RNU6-1067P-201ENST00000384752 107 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 SNORD111-201ENST00000408139 94 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 RNU6-1050P-201ENST00000410388 107 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.31□□□□□ -2.36
SNRPAP09012 MRPS18CP6-201ENST00000423587 223 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 SNRPGP10-201ENST00000432323 225 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 RPS3AP52-201ENST00000435639 297 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
SNRPAP09012 AL392103.1-201ENST00000447000 198 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.31□□□□□ -2.36
SNRPAP09012 RN7SL793P-201ENST00000583259 296 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 AC008133.2-201ENST00000624540 351 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 MIR4251-201ENST00000635819 61 ntBASIC0.31□□□□□ -2.36
SNRPAP09012 Y_RNA.101-201ENST00000363154 102 ntBASIC0.3□□□□□ -2.36
SNRPAP09012 Y_RNA.194-201ENST00000363985 102 ntBASIC0.3□□□□□ -2.36
SNRPAP09012 Y_RNA.404-201ENST00000383978 102 ntBASIC0.3□□□□□ -2.36
SNRPAP09012 AC015818.7-201ENST00000428754 109 ntBASIC0.3□□□□□ -2.36
SNRPAP09012 AC005534.2-201ENST00000431047 433 ntBASIC0.3□□□□□ -2.36
SNRPAP09012 AC087499.7-201ENST00000441958 109 ntBASIC0.3□□□□□ -2.36
SNRPAP09012 MTND3P10-201ENST00000450967 341 ntBASIC0.3□□□□□ -2.36
SNRPAP09012 SUMO1P2-201ENST00000452524 304 ntBASIC0.3□□□□□ -2.36
SNRPAP09012 RNU6-966P-201ENST00000516479 104 ntBASIC0.3□□□□□ -2.36
SNRPAP09012 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
SNRPAP09012 AL589743.1-201ENST00000551932 2712 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 Y_RNA.157-201ENST00000363638 102 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 RNY4P14-201ENST00000363656 96 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 RNU6-324P-201ENST00000363957 106 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 snoU2-30.1-201ENST00000365012 70 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 Y_RNA.450-201ENST00000384198 113 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 MIR15B-201ENST00000385045 98 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 RNU6-131P-201ENST00000391144 107 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 MTCO2P27-201ENST00000420740 428 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.29□□□□□ -2.36
SNRPAP09012 snoU13.21-201ENST00000459368 105 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 NDUFA4P2-201ENST00000489989 244 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.29□□□□□ -2.36
SNRPAP09012 RNU6-120P-201ENST00000516077 103 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 AL136317.1-201ENST00000612653 226 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 AC007742.2-201ENST00000618226 398 ntBASIC0.29□□□□□ -2.36
SNRPAP09012 Y_RNA.9-201ENST00000362354 101 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 SNORD114-7-201ENST00000362520 77 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 Y_RNA.368-201ENST00000365547 113 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 RNU6-767P-201ENST00000384132 107 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 RNU6-1310P-201ENST00000384153 107 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 RNU6-601P-201ENST00000384540 107 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 RNY1P4-201ENST00000384595 115 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 MIR140-201ENST00000385282 100 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 AC092989.1-201ENST00000481235 277 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 RNU6-1012P-201ENST00000516606 109 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 MIR548AR-201ENST00000582191 57 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 AC005972.2-201ENST00000604690 348 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 AL355073.2-201ENST00000612106 557 ntBASIC0.28□□□□□ -2.36
SNRPAP09012 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.28□□□□□ -2.36
SNRPAP09012 MIR1-1-201ENST00000362147 71 ntBASIC0.27□□□□□ -2.37
SNRPAP09012 RNU6-99P-201ENST00000364721 107 ntBASIC0.27□□□□□ -2.37
SNRPAP09012 MIR181A1-201ENST00000385026 110 ntBASIC0.27□□□□□ -2.37
SNRPAP09012 MTND1P4-201ENST00000435196 415 ntBASIC0.27□□□□□ -2.37
SNRPAP09012 AC105313.1-201ENST00000509121 353 ntBASIC0.27□□□□□ -2.37
SNRPAP09012 Y_RNA.708-201ENST00000516950 96 ntBASIC0.27□□□□□ -2.37
SNRPAP09012 RNU6-1213P-201ENST00000517075 94 ntBASIC0.27□□□□□ -2.37
SNRPAP09012 AC011712.1-201ENST00000588959 234 ntBASIC0.27□□□□□ -2.37
SNRPAP09012 AC092794.2-201ENST00000620933 563 ntBASIC0.27□□□□□ -2.37
SNRPAP09012 RNU6-369P-201ENST00000362515 102 ntBASIC0.26□□□□□ -2.37
SNRPAP09012 Y_RNA.540-201ENST00000384638 111 ntBASIC0.26□□□□□ -2.37
SNRPAP09012 MIR548K-201ENST00000408406 116 ntBASIC0.26□□□□□ -2.37
SNRPAP09012 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms