Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AL355073.2-201ENST00000612106 557 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
ERCC1P07992 Y_RNA.205-201ENST00000364128 113 ntBASIC0.28□□□□□ -2.36
ERCC1P07992 RNU6-831P-201ENST00000384548 107 ntBASIC0.28□□□□□ -2.36
ERCC1P07992 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.28□□□□□ -2.36
ERCC1P07992 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.28□□□□□ -2.36
ERCC1P07992 U8.19-201ENST00000459095 133 ntBASIC0.28□□□□□ -2.36
ERCC1P07992 MIR2115-201ENST00000516657 100 ntBASIC0.28□□□□□ -2.36
ERCC1P07992 RNU2-12P-201ENST00000517216 168 ntBASIC0.28□□□□□ -2.36
ERCC1P07992 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.28□□□□□ -2.36
ERCC1P07992 MIR6779-201ENST00000617283 64 ntBASIC0.28□□□□□ -2.36
ERCC1P07992 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.28□□□□□ -2.37
ERCC1P07992 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
ERCC1P07992 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
ERCC1P07992 RNU6-1090P-201ENST00000364065 94 ntBASIC0.27□□□□□ -2.37
ERCC1P07992 Y_RNA.358-201ENST00000365491 99 ntBASIC0.27□□□□□ -2.37
ERCC1P07992 Y_RNA.370-201ENST00000365589 108 ntBASIC0.27□□□□□ -2.37
ERCC1P07992 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
ERCC1P07992 SNORA25.10-201ENST00000515926 124 ntBASIC0.27□□□□□ -2.37
ERCC1P07992 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.27□□□□□ -2.37
ERCC1P07992 AC018462.2-201ENST00000605375 395 ntBASIC0.27□□□□□ -2.37
ERCC1P07992 AC091925.1-201ENST00000623204 462 ntBASIC0.27□□□□□ -2.37
ERCC1P07992 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.27□□□□□ -2.37
ERCC1P07992 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
ERCC1P07992 Y_RNA.168-201ENST00000363740 102 ntBASIC0.26□□□□□ -2.37
ERCC1P07992 MIR573-201ENST00000384964 99 ntBASIC0.26□□□□□ -2.37
ERCC1P07992 RNU6-131P-201ENST00000391144 107 ntBASIC0.26□□□□□ -2.37
ERCC1P07992 SNORD12B-201ENST00000410433 91 ntBASIC0.26□□□□□ -2.37
ERCC1P07992 AC074085.1-201ENST00000413598 418 ntBASIC0.26□□□□□ -2.37
ERCC1P07992 MTND3P21-201ENST00000433774 331 ntBASIC0.26□□□□□ -2.37
ERCC1P07992 Y_RNA.714-201ENST00000517065 90 ntBASIC0.26□□□□□ -2.37
ERCC1P07992 MIR4790-201ENST00000577799 79 ntBASIC0.26□□□□□ -2.37
ERCC1P07992 Y_RNA.51-201ENST00000362725 102 ntBASIC0.25□□□□□ -2.37
ERCC1P07992 SNORD50B-201ENST00000364995 70 ntBASIC0.25□□□□□ -2.37
ERCC1P07992 RNA5SP95-201ENST00000410319 137 ntBASIC0.25□□□□□ -2.37
ERCC1P07992 RNU6-1148P-201ENST00000410992 104 ntBASIC0.25□□□□□ -2.37
ERCC1P07992 RNU6-314P-201ENST00000516574 104 ntBASIC0.25□□□□□ -2.37
ERCC1P07992 AC006380.1-201ENST00000603598 186 ntBASIC0.25□□□□□ -2.37
ERCC1P07992 AC004467.1-201ENST00000615678 330 ntBASIC0.25□□□□□ -2.37
ERCC1P07992 Y_RNA.2-201ENST00000362330 96 ntBASIC0.24□□□□□ -2.37
ERCC1P07992 RNU4-45P-201ENST00000365469 141 ntBASIC0.24□□□□□ -2.37
ERCC1P07992 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
ERCC1P07992 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.24□□□□□ -2.37
ERCC1P07992 AL353997.1-201ENST00000432936 108 ntBASIC0.24□□□□□ -2.37
ERCC1P07992 MTND2P22-201ENST00000444325 1033 ntBASIC0.24□□□□□ -2.37
ERCC1P07992 RNU6-329P-201ENST00000459618 107 ntBASIC0.24□□□□□ -2.37
ERCC1P07992 AC026782.1-201ENST00000512952 449 ntBASIC0.24□□□□□ -2.37
ERCC1P07992 RNU6-506P-201ENST00000516553 94 ntBASIC0.24□□□□□ -2.37
ERCC1P07992 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.24□□□□□ -2.37
ERCC1P07992 AC015726.2-201ENST00000620112 122 ntBASIC0.24□□□□□ -2.37
ERCC1P07992 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
ERCC1P07992 Y_RNA.301-201ENST00000364990 103 ntBASIC0.23□□□□□ -2.37
ERCC1P07992 RNU6-396P-201ENST00000365369 105 ntBASIC0.23□□□□□ -2.37
ERCC1P07992 Y_RNA.402-201ENST00000383972 102 ntBASIC0.23□□□□□ -2.37
ERCC1P07992 AL031003.1-201ENST00000404229 172 ntBASIC0.23□□□□□ -2.37
ERCC1P07992 RNU6-408P-201ENST00000515910 100 ntBASIC0.23□□□□□ -2.37
ERCC1P07992 AL355375.2-201ENST00000574825 175 ntBASIC0.23□□□□□ -2.37
ERCC1P07992 MIR548AR-201ENST00000582191 57 ntBASIC0.23□□□□□ -2.37
ERCC1P07992 MIR8087-201ENST00000612745 78 ntBASIC0.23□□□□□ -2.37
ERCC1P07992 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.23□□□□□ -2.37
ERCC1P07992 RNU6-1301P-201ENST00000362724 104 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 Y_RNA.148-201ENST00000363557 117 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 Y_RNA.157-201ENST00000363638 102 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 Y_RNA.368-201ENST00000365547 113 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 Y_RNA.473-201ENST00000384333 102 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 SNORD116-1-201ENST00000384335 95 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 SNRPGP10-201ENST00000432323 225 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.22□□□□□ -2.37
ERCC1P07992 MTND5P5-201ENST00000503764 376 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 AC116353.2-201ENST00000505332 712 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 RNU6-1016P-201ENST00000516689 94 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 MIR2355-201ENST00000517199 87 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 AC012433.1-201ENST00000588916 398 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 AC005972.2-201ENST00000604690 348 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 AC022079.1-201ENST00000621546 602 ntBASIC0.22□□□□□ -2.37
ERCC1P07992 RNU6-369P-201ENST00000362515 102 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 Y_RNA.172-201ENST00000363765 102 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 RNU6-593P-201ENST00000364716 112 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 Y_RNA.376-201ENST00000365638 108 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 SNORA72-201ENST00000384339 132 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 SNORD38C-201ENST00000384381 69 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 SNORD28B-201ENST00000390993 75 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 Y_RNA.594-201ENST00000410373 140 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 RNA5SP118-201ENST00000410385 109 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.21□□□□□ -2.38
ERCC1P07992 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 MTATP6P17-201ENST00000431030 672 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 MTND1P29-201ENST00000448112 647 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 AC055872.1-201ENST00000570978 278 ntBASIC0.21□□□□□ -2.38
ERCC1P07992 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.21□□□□□ -2.38
ERCC1P07992 MIR18A-201ENST00000362310 71 ntBASIC0.2□□□□□ -2.38
ERCC1P07992 SNORD14E-201ENST00000364009 85 ntBASIC0.2□□□□□ -2.38
ERCC1P07992 RNU6-716P-201ENST00000365621 103 ntBASIC0.2□□□□□ -2.38
ERCC1P07992 MIR181A1-201ENST00000385026 110 ntBASIC0.2□□□□□ -2.38
ERCC1P07992 MIR520H-201ENST00000385126 88 ntBASIC0.2□□□□□ -2.38
ERCC1P07992 RNU6-1050P-201ENST00000410388 107 ntBASIC0.2□□□□□ -2.38
ERCC1P07992 RNU2-61P-201ENST00000411069 191 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms