Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SUMO2P16-201ENST00000519475 264 ntBASIC1.53□□□□□ -2.16
RB1P06400 AC104695.3-201ENST00000604052 296 ntBASIC1.53□□□□□ -2.16
RB1P06400 AP001485.1-201ENST00000604799 199 ntBASIC1.53□□□□□ -2.16
RB1P06400 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
RB1P06400 RNU6-450P-201ENST00000364654 107 ntBASIC1.52□□□□□ -2.17
RB1P06400 SNORA22B-201ENST00000383876 138 ntBASIC1.52□□□□□ -2.17
RB1P06400 RNU6-424P-201ENST00000384367 105 ntBASIC1.52□□□□□ -2.17
RB1P06400 RNU6-823P-201ENST00000391042 103 ntBASIC1.52□□□□□ -2.17
RB1P06400 RNU4-30P-201ENST00000410245 143 ntBASIC1.52□□□□□ -2.17
RB1P06400 RNU6-855P-201ENST00000410395 104 ntBASIC1.52□□□□□ -2.17
RB1P06400 CALM2P4-201ENST00000430810 426 ntBASIC1.52□□□□□ -2.17
RB1P06400 RNA5SP168-201ENST00000516642 112 ntBASIC1.52□□□□□ -2.17
RB1P06400 Y_RNA.721-201ENST00000517207 102 ntBASIC1.52□□□□□ -2.17
RB1P06400 DEFB117-201ENST00000602356 141 ntBASIC1.52□□□□□ -2.17
RB1P06400 AL078603.1-201ENST00000603824 313 ntBASIC1.52□□□□□ -2.17
RB1P06400 AL365434.2-201ENST00000607979 234 ntBASIC1.52□□□□□ -2.17
RB1P06400 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.52□□□□□ -2.17
RB1P06400 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.52□□□□□ -2.17
RB1P06400 SNORD114-22-201ENST00000365423 72 ntBASIC1.51□□□□□ -2.17
RB1P06400 RNU6-101P-201ENST00000410323 104 ntBASIC1.51□□□□□ -2.17
RB1P06400 SNX2P2-201ENST00000424553 323 ntBASIC1.51□□□□□ -2.17
RB1P06400 SNRPGP13-201ENST00000442212 177 ntBASIC1.51□□□□□ -2.17
RB1P06400 RPS20P10-201ENST00000451209 253 ntBASIC1.51□□□□□ -2.17
RB1P06400 AC136932.1-201ENST00000574771 208 ntBASIC1.51□□□□□ -2.17
RB1P06400 AL121890.5-201ENST00000620848 304 ntBASIC1.51□□□□□ -2.17
RB1P06400 RNU4-41P-201ENST00000364426 143 ntBASIC1.5□□□□□ -2.17
RB1P06400 AC117470.1-201ENST00000381974 330 ntBASIC1.5□□□□□ -2.17
RB1P06400 Y_RNA.389-201ENST00000383924 113 ntBASIC1.5□□□□□ -2.17
RB1P06400 U8.16-201ENST00000391279 133 ntBASIC1.5□□□□□ -2.17
RB1P06400 MIR1252-201ENST00000408861 65 ntBASIC1.5□□□□□ -2.17
RB1P06400 RPL30P13-201ENST00000418873 348 ntBASIC1.5□□□□□ -2.17
RB1P06400 AC024067.1-201ENST00000426199 223 ntBASIC1.5□□□□□ -2.17
RB1P06400 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
RB1P06400 RNU6-397P-201ENST00000516226 104 ntBASIC1.5□□□□□ -2.17
RB1P06400 AC020661.2-201ENST00000560114 134 ntBASIC1.5□□□□□ -2.17
RB1P06400 MIR3171-201ENST00000584270 74 ntBASIC1.5□□□□□ -2.17
RB1P06400 AC005972.2-201ENST00000604690 348 ntBASIC1.5□□□□□ -2.17
RB1P06400 RAC1P9-201ENST00000604990 392 ntBASIC1.5□□□□□ -2.17
RB1P06400 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.5□□□□□ -2.17
RB1P06400 RMST_2.1-201ENST00000617263 136 ntBASIC1.5□□□□□ -2.17
RB1P06400 RNU6-1080P-201ENST00000383982 107 ntBASIC1.49□□□□□ -2.17
RB1P06400 Y_RNA.621-201ENST00000411065 96 ntBASIC1.49□□□□□ -2.17
RB1P06400 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
RB1P06400 RNU6-1046P-201ENST00000516538 107 ntBASIC1.49□□□□□ -2.17
RB1P06400 AC011604.1-201ENST00000545978 196 ntBASIC1.49□□□□□ -2.17
RB1P06400 MIR4778-201ENST00000577635 80 ntBASIC1.49□□□□□ -2.17
RB1P06400 SNORD113-5-201ENST00000607261 78 ntBASIC1.49□□□□□ -2.17
RB1P06400 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RB1P06400 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.48□□□□□ -2.17
RB1P06400 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.48□□□□□ -2.17
RB1P06400 Y_RNA.158-201ENST00000363651 101 ntBASIC1.48□□□□□ -2.17
RB1P06400 Y_RNA.183-201ENST00000363882 113 ntBASIC1.48□□□□□ -2.17
RB1P06400 Y_RNA.216-201ENST00000364205 93 ntBASIC1.48□□□□□ -2.17
RB1P06400 RNU4-76P-201ENST00000364509 141 ntBASIC1.48□□□□□ -2.17
RB1P06400 Y_RNA.368-201ENST00000365547 113 ntBASIC1.48□□□□□ -2.17
RB1P06400 Z98949.2-201ENST00000440996 144 ntBASIC1.48□□□□□ -2.17
RB1P06400 AC092991.1-201ENST00000477176 376 ntBASIC1.48□□□□□ -2.17
RB1P06400 AC010655.3-201ENST00000478818 450 ntBASIC1.48□□□□□ -2.17
RB1P06400 SEPT14P8-201ENST00000508026 178 ntBASIC1.48□□□□□ -2.17
RB1P06400 MIR4300-201ENST00000581016 96 ntBASIC1.48□□□□□ -2.17
RB1P06400 AL078604.3-201ENST00000615580 211 ntBASIC1.48□□□□□ -2.17
RB1P06400 MIR376A1-201ENST00000616574 68 ntBASIC1.48□□□□□ -2.17
RB1P06400 MIR6734-201ENST00000621166 68 ntBASIC1.48□□□□□ -2.17
RB1P06400 MIRLET7C-201ENST00000362160 84 ntBASIC1.47□□□□□ -2.17
RB1P06400 Y_RNA.11-201ENST00000362375 109 ntBASIC1.47□□□□□ -2.17
RB1P06400 Y_RNA.286-201ENST00000364813 102 ntBASIC1.47□□□□□ -2.17
RB1P06400 Y_RNA.310-201ENST00000365063 113 ntBASIC1.47□□□□□ -2.17
RB1P06400 Y_RNA.341-201ENST00000365341 102 ntBASIC1.47□□□□□ -2.17
RB1P06400 Y_RNA.380-201ENST00000365663 111 ntBASIC1.47□□□□□ -2.17
RB1P06400 Y_RNA.456-201ENST00000384232 111 ntBASIC1.47□□□□□ -2.17
RB1P06400 AL590004.1-201ENST00000405321 300 ntBASIC1.47□□□□□ -2.17
RB1P06400 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
RB1P06400 POLR2KP2-201ENST00000438155 177 ntBASIC1.47□□□□□ -2.17
RB1P06400 RPL39P38-201ENST00000467018 153 ntBASIC1.47□□□□□ -2.17
RB1P06400 Y_RNA.701-201ENST00000516812 110 ntBASIC1.47□□□□□ -2.17
RB1P06400 RNU6-897P-201ENST00000517135 105 ntBASIC1.47□□□□□ -2.17
RB1P06400 MIR3145-201ENST00000580727 82 ntBASIC1.47□□□□□ -2.17
RB1P06400 AC106754.2-201ENST00000623006 233 ntBASIC1.47□□□□□ -2.17
RB1P06400 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
RB1P06400 RNU6-199P-201ENST00000362954 107 ntBASIC1.46□□□□□ -2.18
RB1P06400 Y_RNA.383-201ENST00000383855 97 ntBASIC1.46□□□□□ -2.18
RB1P06400 SNORA72-201ENST00000384339 132 ntBASIC1.46□□□□□ -2.18
RB1P06400 Y_RNA.540-201ENST00000384638 111 ntBASIC1.46□□□□□ -2.18
RB1P06400 RNU6-1105P-201ENST00000384774 107 ntBASIC1.46□□□□□ -2.18
RB1P06400 AL135790.2-201ENST00000437701 267 ntBASIC1.46□□□□□ -2.18
RB1P06400 RNU7-12P-201ENST00000516030 62 ntBASIC1.46□□□□□ -2.18
RB1P06400 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.46□□□□□ -2.18
RB1P06400 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.46□□□□□ -2.18
RB1P06400 AL356055.1-201ENST00000602528 446 ntBASIC1.46□□□□□ -2.18
RB1P06400 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
RB1P06400 SNORD113-8-201ENST00000363497 74 ntBASIC1.45□□□□□ -2.18
RB1P06400 RNU6-1323P-201ENST00000384025 107 ntBASIC1.45□□□□□ -2.18
RB1P06400 Y_RNA.455-201ENST00000384230 98 ntBASIC1.45□□□□□ -2.18
RB1P06400 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
RB1P06400 HMGN1P10-201ENST00000474557 553 ntBASIC1.45□□□□□ -2.18
RB1P06400 RPL30P7-201ENST00000479312 323 ntBASIC1.45□□□□□ -2.18
RB1P06400 AL512310.8-201ENST00000550183 120 ntBASIC1.45□□□□□ -2.18
RB1P06400 MIR3660-201ENST00000584845 100 ntBASIC1.45□□□□□ -2.18
RB1P06400 AL591926.4-201ENST00000616895 298 ntBASIC1.45□□□□□ -2.18
RB1P06400 AC068647.2-201ENST00000637380 353 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms