Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AP000753.3-201ENST00000604083 169 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 AC073114.1-201ENST00000612027 490 ntBASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.13□□□□□ -2.43
HLA-DQB2P05538 SNORD114-26-201ENST00000363543 72 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 RNU6-879P-201ENST00000364328 108 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 SNORA51.10-201ENST00000384418 136 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 MTCO2P27-201ENST00000420740 428 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 BTF3P11-201ENST00000426582 477 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 RNU6-256P-201ENST00000516747 97 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 RPL23AP91-201ENST00000569211 455 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 MIR2909-201ENST00000617113 69 ntBASIC-0.14□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 RNY1P16-201ENST00000363063 111 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 RNU6-716P-201ENST00000365621 103 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 RNU6-700P-201ENST00000391043 107 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 RNU7-87P-201ENST00000459343 62 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 RNU6-830P-201ENST00000516353 107 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 LRRC34P1-201ENST00000542742 915 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 AC090897.1-201ENST00000580909 226 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 MIR4264-201ENST00000583520 66 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 AC024933.1-201ENST00000608472 348 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 MTND1P7-201ENST00000632801 297 ntBASIC-0.15□□□□□ -2.43
HLA-DQB2P05538 RNU6-125P-201ENST00000384505 107 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 MIR190B-201ENST00000401119 79 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 MIR938-201ENST00000401216 83 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 SNORA40.9-201ENST00000515895 93 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 RNU6-415P-201ENST00000516252 97 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 RNU2-12P-201ENST00000517216 168 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 MIR5701-3-201ENST00000578890 82 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 MIR5701-1-201ENST00000585138 82 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 AC010525.2-201ENST00000590920 195 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 AC008608.1-201ENST00000603910 127 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 MIR5701-2-201ENST00000615634 82 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 AC098679.4-201ENST00000624241 654 ntBASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.16□□□□□ -2.44
HLA-DQB2P05538 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 SNORD14E-201ENST00000364009 85 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 SNORD38C-201ENST00000384381 69 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 U8.19-201ENST00000459095 133 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 U8.22-201ENST00000459141 133 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 HMGN1P10-201ENST00000474557 553 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 MIR3678-201ENST00000578455 94 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 AC005972.2-201ENST00000604690 348 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 AC023510.2-201ENST00000622162 746 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 MIR371B-201ENST00000638082 66 ntBASIC-0.17□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.18□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.18□□□□□ -2.44
HLA-DQB2P05538 SNORD116-11-201ENST00000383882 92 ntBASIC-0.18□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.18□□□□□ -2.44
HLA-DQB2P05538 U8.17-201ENST00000391292 132 ntBASIC-0.18□□□□□ -2.44
HLA-DQB2P05538 RNU2-59P-201ENST00000410482 191 ntBASIC-0.18□□□□□ -2.44
HLA-DQB2P05538 SNRPGP14-201ENST00000435400 219 ntBASIC-0.18□□□□□ -2.44
HLA-DQB2P05538 RNU6-956P-201ENST00000458868 103 ntBASIC-0.18□□□□□ -2.44
HLA-DQB2P05538 Pinc.1-201ENST00000616452 154 ntBASIC-0.18□□□□□ -2.44
HLA-DQB2P05538 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 RNU6-318P-201ENST00000384283 103 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 RNU7-62P-201ENST00000458856 62 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 RNU2-13P-201ENST00000515909 113 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 RNU7-181P-201ENST00000517234 74 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 MIR4791-201ENST00000607666 84 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 uc_338.6-201ENST00000613544 171 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 AC240442.1-201ENST00000616055 283 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 uc_338.4-201ENST00000616635 176 ntBASIC-0.19□□□□□ -2.44
HLA-DQB2P05538 RNU6-874P-201ENST00000362390 105 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 SNORA9.1-201ENST00000362412 131 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 SNORA36.1-201ENST00000363424 132 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 SNORA72-201ENST00000384339 132 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 RNU6-364P-201ENST00000384387 107 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 SEPT14P3-201ENST00000439401 183 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 AL732372.2-207ENST00000445840 183 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 SEPT14P2-201ENST00000453405 183 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 RNU7-102P-201ENST00000458948 62 ntBASIC-0.2□□□□□ -2.44
HLA-DQB2P05538 RPL23AP54-201ENST00000495129 419 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms