Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC105417.1-201ENST00000514691 285 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 RNU6-475P-201ENST00000516073 104 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 RNU6-830P-201ENST00000516353 107 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.69□□□□□ -2.68
HMGN1P05114 MIR548AX-201ENST00000580117 73 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 AC080013.3-201ENST00000606839 578 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 AC093726.3-201ENST00000637588 150 ntBASIC-1.69□□□□□ -2.68
HMGN1P05114 SNORD14E-201ENST00000364009 85 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 RNU4-36P-201ENST00000364294 144 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 RNU6-169P-201ENST00000365336 107 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 RNU6-47P-201ENST00000383866 107 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 SNORD38B-201ENST00000384690 67 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 MIR876-201ENST00000401147 81 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 AC093303.1-201ENST00000514549 295 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 SCARNA1-201ENST00000517138 166 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.7□□□□□ -2.68
HMGN1P05114 AL355297.3-201ENST00000604082 446 ntBASIC-1.7□□□□□ -2.68
HMGN1P05114 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.71□□□□□ -2.68
HMGN1P05114 RNU6-784P-201ENST00000384330 106 ntBASIC-1.71□□□□□ -2.68
HMGN1P05114 AL512286.1-201ENST00000439244 400 ntBASIC-1.71□□□□□ -2.68
HMGN1P05114 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.71□□□□□ -2.68
HMGN1P05114 AC084368.1-201ENST00000620935 65 ntBASIC-1.71□□□□□ -2.68
HMGN1P05114 SNORD114-15-201ENST00000364687 72 ntBASIC-1.72□□□□□ -2.68
HMGN1P05114 MIR635-201ENST00000384830 98 ntBASIC-1.72□□□□□ -2.68
HMGN1P05114 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.72□□□□□ -2.68
HMGN1P05114 RNU7-73P-201ENST00000458743 63 ntBASIC-1.72□□□□□ -2.68
HMGN1P05114 snoU13.16-201ENST00000459350 104 ntBASIC-1.72□□□□□ -2.68
HMGN1P05114 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.72□□□□□ -2.68
HMGN1P05114 AC105029.1-201ENST00000520250 669 ntBASIC-1.72□□□□□ -2.68
HMGN1P05114 AC005771.1-201ENST00000585581 349 ntBASIC-1.72□□□□□ -2.68
HMGN1P05114 U2.17-201ENST00000611454 95 ntBASIC-1.72□□□□□ -2.68
HMGN1P05114 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.72□□□□□ -2.68
HMGN1P05114 SNORA22B-201ENST00000383876 138 ntBASIC-1.73□□□□□ -2.69
HMGN1P05114 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.73□□□□□ -2.69
HMGN1P05114 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.73□□□□□ -2.69
HMGN1P05114 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.73□□□□□ -2.69
HMGN1P05114 AC104010.1-201ENST00000616889 150 ntBASIC-1.73□□□□□ -2.69
HMGN1P05114 AC022960.3-201ENST00000619794 441 ntBASIC-1.73□□□□□ -2.69
HMGN1P05114 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.74□□□□□ -2.69
HMGN1P05114 SNORD93-201ENST00000408813 74 ntBASIC-1.74□□□□□ -2.69
HMGN1P05114 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.74□□□□□ -2.69
HMGN1P05114 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.74□□□□□ -2.69
HMGN1P05114 RNU7-181P-201ENST00000517234 74 ntBASIC-1.74□□□□□ -2.69
HMGN1P05114 AC069431.2-201ENST00000604149 1099 ntBASIC-1.74□□□□□ -2.69
HMGN1P05114 AC023510.2-201ENST00000622162 746 ntBASIC-1.74□□□□□ -2.69
HMGN1P05114 AL162376.1-201ENST00000624117 175 ntBASIC-1.74□□□□□ -2.69
HMGN1P05114 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 SNORD115-32-201ENST00000364079 82 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 RNU6-541P-201ENST00000384709 110 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 MIR153-2-201ENST00000385225 87 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.75□□□□□ -2.69
HMGN1P05114 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.75□□□□□ -2.69
HMGN1P05114 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.75□□□□□ -2.69
HMGN1P05114 RNU6-274P-201ENST00000459566 107 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 GMFBP1-201ENST00000467831 427 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 SCOCP1-201ENST00000554676 349 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 MIR4703-201ENST00000577728 79 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 AL136370.1-201ENST00000608166 691 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 uc_338.19-201ENST00000616808 99 ntBASIC-1.75□□□□□ -2.69
HMGN1P05114 RNU6-324P-201ENST00000363957 106 ntBASIC-1.76□□□□□ -2.69
HMGN1P05114 U8.6-201ENST00000364939 135 ntBASIC-1.76□□□□□ -2.69
HMGN1P05114 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.76□□□□□ -2.69
HMGN1P05114 AL157687.1-201ENST00000554853 619 ntBASIC-1.76□□□□□ -2.69
HMGN1P05114 AP000811.1-201ENST00000603803 651 ntBASIC-1.76□□□□□ -2.69
HMGN1P05114 SNORD114-25-201ENST00000363742 72 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 RNU6-606P-201ENST00000384721 111 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 MIR204-201ENST00000385200 110 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 RNU6-757P-201ENST00000410334 100 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.77□□□□□ -2.69
HMGN1P05114 snoU13.2-201ENST00000459201 104 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 RNU2-13P-201ENST00000515909 113 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 MTATP6P25-201ENST00000574491 261 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 AC105081.1-201ENST00000617727 106 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 AC072046.2-201ENST00000618366 268 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 AL158209.2-201ENST00000619266 216 ntBASIC-1.77□□□□□ -2.69
HMGN1P05114 RNU6-740P-201ENST00000364734 105 ntBASIC-1.78□□□□□ -2.69
HMGN1P05114 MIR521-1-201ENST00000384902 87 ntBASIC-1.78□□□□□ -2.69
HMGN1P05114 MTATP6P20-201ENST00000414147 562 ntBASIC-1.78□□□□□ -2.69
HMGN1P05114 MTCO2P27-201ENST00000420740 428 ntBASIC-1.78□□□□□ -2.69
HMGN1P05114 SNRPGP10-201ENST00000432323 225 ntBASIC-1.78□□□□□ -2.69
HMGN1P05114 AC236972.2-201ENST00000434979 310 ntBASIC-1.78□□□□□ -2.69
HMGN1P05114 SNORD27.1-201ENST00000516319 72 ntBASIC-1.78□□□□□ -2.69
HMGN1P05114 AC022616.4-201ENST00000522985 181 ntBASIC-1.78□□□□□ -2.69
HMGN1P05114 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.78□□□□□ -2.69
HMGN1P05114 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.79□□□□□ -2.7
HMGN1P05114 RNU6-159P-201ENST00000391080 106 ntBASIC-1.79□□□□□ -2.7
HMGN1P05114 MTND1P14-201ENST00000427400 950 ntBASIC-1.79□□□□□ -2.7
HMGN1P05114 U8.19-201ENST00000459095 133 ntBASIC-1.79□□□□□ -2.7
HMGN1P05114 U8.22-201ENST00000459141 133 ntBASIC-1.79□□□□□ -2.7
HMGN1P05114 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.79□□□□□ -2.7
HMGN1P05114 AC064836.2-201ENST00000609491 462 ntBASIC-1.79□□□□□ -2.7
HMGN1P05114 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.79□□□□□ -2.7
HMGN1P05114 AL589826.1-201ENST00000340697 249 ntBASIC-1.8□□□□□ -2.7
HMGN1P05114 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.8□□□□□ -2.7
HMGN1P05114 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.8□□□□□ -2.7
HMGN1P05114 MIR4499-201ENST00000584834 69 ntBASIC-1.8□□□□□ -2.7
HMGN1P05114 AL133173.2-201ENST00000614270 90 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms