Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AL136370.1-201ENST00000608166 691 ntBASIC-1.09□□□□□ -2.58
SIX6O95475 AL158209.2-201ENST00000619266 216 ntBASIC-1.09□□□□□ -2.58
SIX6O95475 AL589826.1-201ENST00000340697 249 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 MT-TF-201ENST00000387314 71 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 MIR196A1-201ENST00000388006 70 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 RNA5SP25-201ENST00000410815 110 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 MTATP6P20-201ENST00000414147 562 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 SNRPGP10-201ENST00000432323 225 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.1□□□□□ -2.59
SIX6O95475 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.1□□□□□ -2.59
SIX6O95475 SCOCP1-201ENST00000554676 349 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 AC064836.2-201ENST00000609491 462 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 U2.17-201ENST00000611454 95 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 AC010205.1-201ENST00000616668 449 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 ZNF299P-201ENST00000406845 1804 ntBASIC-1.1□□□□□ -2.59
SIX6O95475 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 SNORD14E-201ENST00000364009 85 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 RNU6-660P-201ENST00000364566 109 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 SNORA1.2-201ENST00000365189 134 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 SNORD38B-201ENST00000384690 67 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
SIX6O95475 RNU6-475P-201ENST00000516073 104 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 SNORD27.1-201ENST00000516319 72 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.11□□□□□ -2.59
SIX6O95475 AC069431.2-201ENST00000604149 1099 ntBASIC-1.11□□□□□ -2.59
SIX6O95475 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.11□□□□□ -2.59
SIX6O95475 RNU6-931P-201ENST00000363850 107 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 SNORD115-32-201ENST00000364079 82 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 RNU6-740P-201ENST00000364734 105 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 RNU6-606P-201ENST00000384721 111 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 AC104850.1-201ENST00000435940 476 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 snoU13.16-201ENST00000459350 104 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 RNU2-13P-201ENST00000515909 113 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 UBL5P4-201ENST00000562584 236 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 AL355297.3-201ENST00000604082 446 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 AC072046.2-201ENST00000618366 268 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 AC084368.1-201ENST00000620935 65 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 AC023510.2-201ENST00000622162 746 ntBASIC-1.12□□□□□ -2.59
SIX6O95475 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.12□□□□□ -2.59
SIX6O95475 SNORA22B-201ENST00000383876 138 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 RNU6-74P-201ENST00000384235 107 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 RNU6-541P-201ENST00000384709 110 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 MIR521-1-201ENST00000384902 87 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 MIR153-2-201ENST00000385225 87 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 RNU6-159P-201ENST00000391080 106 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 SNORD93-201ENST00000408813 74 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 MTATP6P23-201ENST00000440153 476 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 snoU13.2-201ENST00000459201 104 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 GMFBP1-201ENST00000467831 427 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 RNA5SP66-201ENST00000517178 101 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.13□□□□□ -2.59
SIX6O95475 AL157687.1-201ENST00000554853 619 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 AL133173.2-201ENST00000614270 90 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 AC009878.1-201ENST00000621819 340 ntBASIC-1.13□□□□□ -2.59
SIX6O95475 RNU6-324P-201ENST00000363957 106 ntBASIC-1.14□□□□□ -2.59
SIX6O95475 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.14□□□□□ -2.59
SIX6O95475 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.14□□□□□ -2.59
SIX6O95475 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.14□□□□□ -2.59
SIX6O95475 SNORA25.10-201ENST00000515926 124 ntBASIC-1.14□□□□□ -2.59
SIX6O95475 RNU6-276P-201ENST00000516114 96 ntBASIC-1.14□□□□□ -2.59
SIX6O95475 AC104576.1-201ENST00000524225 88 ntBASIC-1.14□□□□□ -2.59
SIX6O95475 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.14□□□□□ -2.59
SIX6O95475 AC009248.2-201ENST00000619826 254 ntBASIC-1.14□□□□□ -2.59
SIX6O95475 AL162376.1-201ENST00000624117 175 ntBASIC-1.14□□□□□ -2.59
SIX6O95475 MIR30D-201ENST00000362283 70 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 Y_RNA.18-201ENST00000362461 102 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.15□□□□□ -2.59
SIX6O95475 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.15□□□□□ -2.59
SIX6O95475 GPR143P-201ENST00000434155 205 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 AC236972.2-201ENST00000434979 310 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 Z82188.1-201ENST00000436709 154 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 SNORA19.3-201ENST00000516165 130 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 Vault.3-201ENST00000516676 95 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 AP003168.1-201ENST00000530091 307 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 PIGPP4-201ENST00000584447 307 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 AP000811.1-201ENST00000603803 651 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 U6.115-201ENST00000636045 103 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 AC099654.13-201ENST00000639774 207 ntBASIC-1.15□□□□□ -2.59
SIX6O95475 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.16□□□□□ -2.6
SIX6O95475 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.16□□□□□ -2.6
SIX6O95475 SNORD114-15-201ENST00000364687 72 ntBASIC-1.16□□□□□ -2.6
SIX6O95475 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.16□□□□□ -2.6
SIX6O95475 RNU6-35P-201ENST00000384530 107 ntBASIC-1.16□□□□□ -2.6
SIX6O95475 MIR635-201ENST00000384830 98 ntBASIC-1.16□□□□□ -2.6
SIX6O95475 HSPE1P23-201ENST00000509838 286 ntBASIC-1.16□□□□□ -2.6
SIX6O95475 AC105081.1-201ENST00000617727 106 ntBASIC-1.16□□□□□ -2.6
SIX6O95475 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.17□□□□□ -2.6
SIX6O95475 U8.6-201ENST00000364939 135 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 SNORA1-201ENST00000384107 130 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 RNU6-291P-201ENST00000384720 107 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 AL590002.1-201ENST00000406554 418 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 RPL30P16-201ENST00000419341 429 ntBASIC-1.17□□□□□ -2.6
SIX6O95475 MTATP6P14-201ENST00000455189 673 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms