Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.44□□□□□ -2.18
MBD4O95243 MIR4762-201ENST00000585261 75 ntBASIC1.44□□□□□ -2.18
MBD4O95243 MIR1302-2-201ENST00000607096 138 ntBASIC1.44□□□□□ -2.18
MBD4O95243 AL591926.4-201ENST00000616895 298 ntBASIC1.44□□□□□ -2.18
MBD4O95243 uc_338.22-201ENST00000622722 187 ntBASIC1.44□□□□□ -2.18
MBD4O95243 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
MBD4O95243 Y_RNA.172-201ENST00000363765 102 ntBASIC1.43□□□□□ -2.18
MBD4O95243 SNORD14.1-201ENST00000365609 90 ntBASIC1.43□□□□□ -2.18
MBD4O95243 Y_RNA.471-201ENST00000384312 102 ntBASIC1.43□□□□□ -2.18
MBD4O95243 Y_RNA.551-201ENST00000384661 102 ntBASIC1.43□□□□□ -2.18
MBD4O95243 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.43□□□□□ -2.18
MBD4O95243 AC091895.1-201ENST00000624494 256 ntBASIC1.43□□□□□ -2.18
MBD4O95243 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
MBD4O95243 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
MBD4O95243 Y_RNA.80-201ENST00000362996 102 ntBASIC1.42□□□□□ -2.18
MBD4O95243 Y_RNA.456-201ENST00000384232 111 ntBASIC1.42□□□□□ -2.18
MBD4O95243 Y_RNA.485-201ENST00000384395 102 ntBASIC1.42□□□□□ -2.18
MBD4O95243 RNU6-21P-201ENST00000384710 107 ntBASIC1.42□□□□□ -2.18
MBD4O95243 RPL39P39-201ENST00000455840 151 ntBASIC1.42□□□□□ -2.18
MBD4O95243 SNORA31.4-201ENST00000516049 129 ntBASIC1.42□□□□□ -2.18
MBD4O95243 RNU7-116P-201ENST00000516940 62 ntBASIC1.42□□□□□ -2.18
MBD4O95243 AC090971.5-201ENST00000621102 293 ntBASIC1.42□□□□□ -2.18
MBD4O95243 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
MBD4O95243 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
MBD4O95243 Y_RNA.253-201ENST00000364562 112 ntBASIC1.41□□□□□ -2.18
MBD4O95243 Y_RNA.341-201ENST00000365341 102 ntBASIC1.41□□□□□ -2.18
MBD4O95243 Y_RNA.368-201ENST00000365547 113 ntBASIC1.41□□□□□ -2.18
MBD4O95243 RNU6-1323P-201ENST00000384025 107 ntBASIC1.41□□□□□ -2.18
MBD4O95243 Y_RNA.424-201ENST00000384063 103 ntBASIC1.41□□□□□ -2.18
MBD4O95243 MIR452-201ENST00000385020 85 ntBASIC1.41□□□□□ -2.18
MBD4O95243 MIR618-201ENST00000385287 98 ntBASIC1.41□□□□□ -2.18
MBD4O95243 AC104332.1-201ENST00000440471 797 ntBASIC1.41□□□□□ -2.18
MBD4O95243 Y_RNA.639-201ENST00000458981 102 ntBASIC1.41□□□□□ -2.18
MBD4O95243 RNU6-1116P-201ENST00000517269 99 ntBASIC1.41□□□□□ -2.18
MBD4O95243 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
MBD4O95243 AC007485.1-201ENST00000616755 206 ntBASIC1.41□□□□□ -2.18
MBD4O95243 SNORD42.2-201ENST00000365570 69 ntBASIC1.4□□□□□ -2.19
MBD4O95243 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
MBD4O95243 RNU6-1054P-201ENST00000411293 104 ntBASIC1.4□□□□□ -2.19
MBD4O95243 PIGPP3-201ENST00000425307 415 ntBASIC1.4□□□□□ -2.19
MBD4O95243 AC114811.1-201ENST00000507207 168 ntBASIC1.4□□□□□ -2.19
MBD4O95243 DEFB117-201ENST00000602356 141 ntBASIC1.4□□□□□ -2.19
MBD4O95243 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.39□□□□□ -2.19
MBD4O95243 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
MBD4O95243 MIR337-201ENST00000362281 93 ntBASIC1.39□□□□□ -2.19
MBD4O95243 SNORD81.1-201ENST00000363064 77 ntBASIC1.39□□□□□ -2.19
MBD4O95243 RNU6-937P-201ENST00000384325 106 ntBASIC1.39□□□□□ -2.19
MBD4O95243 HMGN1P7-201ENST00000491722 313 ntBASIC1.39□□□□□ -2.19
MBD4O95243 SNORA25.10-201ENST00000515926 124 ntBASIC1.39□□□□□ -2.19
MBD4O95243 Y_RNA.676-201ENST00000516393 96 ntBASIC1.39□□□□□ -2.19
MBD4O95243 Y_RNA.714-201ENST00000517065 90 ntBASIC1.39□□□□□ -2.19
MBD4O95243 AL022345.2-201ENST00000606307 135 ntBASIC1.39□□□□□ -2.19
MBD4O95243 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
MBD4O95243 MIR369-201ENST00000362155 70 ntBASIC1.38□□□□□ -2.19
MBD4O95243 Y_RNA.143-201ENST00000363520 106 ntBASIC1.38□□□□□ -2.19
MBD4O95243 Y_RNA.310-201ENST00000365063 113 ntBASIC1.38□□□□□ -2.19
MBD4O95243 SNORA63.7-201ENST00000365579 123 ntBASIC1.38□□□□□ -2.19
MBD4O95243 Y_RNA.445-201ENST00000384168 102 ntBASIC1.38□□□□□ -2.19
MBD4O95243 Y_RNA.509-201ENST00000384506 99 ntBASIC1.38□□□□□ -2.19
MBD4O95243 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
MBD4O95243 MTND4P19-201ENST00000446659 478 ntBASIC1.38□□□□□ -2.19
MBD4O95243 LINC01399-202ENST00000458450 244 ntBASIC1.38□□□□□ -2.19
MBD4O95243 SNORA31.2-201ENST00000516019 134 ntBASIC1.38□□□□□ -2.19
MBD4O95243 RNU7-40P-201ENST00000516397 64 ntBASIC1.38□□□□□ -2.19
MBD4O95243 FAM106DP-201ENST00000586416 501 ntBASIC1.38□□□□□ -2.19
MBD4O95243 BX284668.6-201ENST00000606899 438 ntBASIC1.38□□□□□ -2.19
MBD4O95243 AL050343.2-201ENST00000607338 280 ntBASIC1.38□□□□□ -2.19
MBD4O95243 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.38□□□□□ -2.19
MBD4O95243 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.38□□□□□ -2.19
MBD4O95243 MIR8070-201ENST00000616510 88 ntBASIC1.38□□□□□ -2.19
MBD4O95243 RNU6-939P-201ENST00000384634 107 ntBASIC1.37□□□□□ -2.19
MBD4O95243 MIR526A1-201ENST00000384897 85 ntBASIC1.37□□□□□ -2.19
MBD4O95243 MIR522-201ENST00000385071 87 ntBASIC1.37□□□□□ -2.19
MBD4O95243 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.37□□□□□ -2.19
MBD4O95243 AC245047.7-201ENST00000440265 293 ntBASIC1.37□□□□□ -2.19
MBD4O95243 AL133373.1-201ENST00000497098 94 ntBASIC1.37□□□□□ -2.19
MBD4O95243 SEPT14P8-201ENST00000508026 178 ntBASIC1.37□□□□□ -2.19
MBD4O95243 RNU6-947P-201ENST00000516264 106 ntBASIC1.37□□□□□ -2.19
MBD4O95243 SNORA70.22-201ENST00000517160 124 ntBASIC1.37□□□□□ -2.19
MBD4O95243 AP003357.1-201ENST00000604497 148 ntBASIC1.37□□□□□ -2.19
MBD4O95243 SNORD113-5-201ENST00000607261 78 ntBASIC1.37□□□□□ -2.19
MBD4O95243 AC027335.2-201ENST00000624030 375 ntBASIC1.37□□□□□ -2.19
MBD4O95243 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
MBD4O95243 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
MBD4O95243 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
MBD4O95243 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
MBD4O95243 snoU2-30.1-201ENST00000365012 70 ntBASIC1.36□□□□□ -2.19
MBD4O95243 Y_RNA.336-201ENST00000365307 109 ntBASIC1.36□□□□□ -2.19
MBD4O95243 Y_RNA.419-201ENST00000384041 102 ntBASIC1.36□□□□□ -2.19
MBD4O95243 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
MBD4O95243 RNU6-1248P-201ENST00000391096 64 ntBASIC1.36□□□□□ -2.19
MBD4O95243 RNU6-131P-201ENST00000391144 107 ntBASIC1.36□□□□□ -2.19
MBD4O95243 RNU4-30P-201ENST00000410245 143 ntBASIC1.36□□□□□ -2.19
MBD4O95243 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
MBD4O95243 HMGN2P32-201ENST00000444648 269 ntBASIC1.36□□□□□ -2.19
MBD4O95243 HMGN1P10-201ENST00000474557 553 ntBASIC1.36□□□□□ -2.19
MBD4O95243 POLR3GP1-201ENST00000594073 261 ntBASIC1.36□□□□□ -2.19
MBD4O95243 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
MBD4O95243 AL160413.1-201ENST00000622780 310 ntBASIC1.36□□□□□ -2.19
MBD4O95243 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms