Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 Y_RNA.721-201ENST00000517207 102 ntBASIC1.54□□□□□ -2.16
RTN3O95197 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.54□□□□□ -2.16
RTN3O95197 AL161670.1-201ENST00000554348 137 ntBASIC1.54□□□□□ -2.16
RTN3O95197 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.54□□□□□ -2.16
RTN3O95197 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.54□□□□□ -2.16
RTN3O95197 MIRLET7C-201ENST00000362160 84 ntBASIC1.53□□□□□ -2.16
RTN3O95197 SNORD81.1-201ENST00000363064 77 ntBASIC1.53□□□□□ -2.16
RTN3O95197 Y_RNA.394-201ENST00000383942 103 ntBASIC1.53□□□□□ -2.16
RTN3O95197 RNU6-1080P-201ENST00000383982 107 ntBASIC1.53□□□□□ -2.16
RTN3O95197 Y_RNA.456-201ENST00000384232 111 ntBASIC1.53□□□□□ -2.16
RTN3O95197 Y_RNA.645-201ENST00000391229 102 ntBASIC1.53□□□□□ -2.16
RTN3O95197 RNU6-101P-201ENST00000410323 104 ntBASIC1.53□□□□□ -2.16
RTN3O95197 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.53□□□□□ -2.16
RTN3O95197 AC009474.2-201ENST00000451383 136 ntBASIC1.53□□□□□ -2.16
RTN3O95197 SEPT14P8-201ENST00000508026 178 ntBASIC1.53□□□□□ -2.16
RTN3O95197 Y_RNA.715-201ENST00000517082 110 ntBASIC1.53□□□□□ -2.16
RTN3O95197 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.53□□□□□ -2.16
RTN3O95197 SNORA4-201ENST00000584302 138 ntBASIC1.53□□□□□ -2.16
RTN3O95197 DEFB117-201ENST00000602356 141 ntBASIC1.53□□□□□ -2.16
RTN3O95197 AL513534.2-201ENST00000603836 250 ntBASIC1.53□□□□□ -2.16
RTN3O95197 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
RTN3O95197 U8.1-201ENST00000362843 134 ntBASIC1.52□□□□□ -2.17
RTN3O95197 Y_RNA.341-201ENST00000365341 102 ntBASIC1.52□□□□□ -2.17
RTN3O95197 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
RTN3O95197 RNU6-823P-201ENST00000391042 103 ntBASIC1.52□□□□□ -2.17
RTN3O95197 MIR548P-201ENST00000408336 84 ntBASIC1.52□□□□□ -2.17
RTN3O95197 MIR1276-201ENST00000408707 83 ntBASIC1.52□□□□□ -2.17
RTN3O95197 MTCO2P12-201ENST00000427426 682 ntBASIC1.52□□□□□ -2.17
RTN3O95197 U8.19-201ENST00000459095 133 ntBASIC1.52□□□□□ -2.17
RTN3O95197 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
RTN3O95197 MIR3664-201ENST00000579074 99 ntBASIC1.52□□□□□ -2.17
RTN3O95197 SNORD113-5-201ENST00000607261 78 ntBASIC1.52□□□□□ -2.17
RTN3O95197 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.52□□□□□ -2.17
RTN3O95197 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RTN3O95197 SNORD68-201ENST00000363214 84 ntBASIC1.51□□□□□ -2.17
RTN3O95197 Y_RNA.327-201ENST00000365201 102 ntBASIC1.51□□□□□ -2.17
RTN3O95197 Y_RNA.368-201ENST00000365547 113 ntBASIC1.51□□□□□ -2.17
RTN3O95197 AC117470.1-201ENST00000381974 330 ntBASIC1.51□□□□□ -2.17
RTN3O95197 SNORA72-201ENST00000384339 132 ntBASIC1.51□□□□□ -2.17
RTN3O95197 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RTN3O95197 CYCTP-201ENST00000504253 315 ntBASIC1.51□□□□□ -2.17
RTN3O95197 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.51□□□□□ -2.17
RTN3O95197 CYP3A52P-201ENST00000563326 91 ntBASIC1.51□□□□□ -2.17
RTN3O95197 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.51□□□□□ -2.17
RTN3O95197 AL391987.6-201ENST00000305671 199 ntBASIC1.5□□□□□ -2.17
RTN3O95197 Y_RNA.138-201ENST00000363462 102 ntBASIC1.5□□□□□ -2.17
RTN3O95197 Y_RNA.183-201ENST00000363882 113 ntBASIC1.5□□□□□ -2.17
RTN3O95197 U8.5-201ENST00000364528 136 ntBASIC1.5□□□□□ -2.17
RTN3O95197 Y_RNA.310-201ENST00000365063 113 ntBASIC1.5□□□□□ -2.17
RTN3O95197 Y_RNA.389-201ENST00000383924 113 ntBASIC1.5□□□□□ -2.17
RTN3O95197 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
RTN3O95197 MIR653-201ENST00000385279 96 ntBASIC1.5□□□□□ -2.17
RTN3O95197 MIR891A-201ENST00000401237 79 ntBASIC1.5□□□□□ -2.17
RTN3O95197 SNRPGP13-201ENST00000442212 177 ntBASIC1.5□□□□□ -2.17
RTN3O95197 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
RTN3O95197 RNU6-322P-201ENST00000516010 103 ntBASIC1.5□□□□□ -2.17
RTN3O95197 RN7SKP88-201ENST00000516847 250 ntBASIC1.5□□□□□ -2.17
RTN3O95197 RNU7-116P-201ENST00000516940 62 ntBASIC1.5□□□□□ -2.17
RTN3O95197 Y_RNA.711-201ENST00000516993 102 ntBASIC1.5□□□□□ -2.17
RTN3O95197 AC090049.2-201ENST00000550377 109 ntBASIC1.5□□□□□ -2.17
RTN3O95197 AC136932.1-201ENST00000574771 208 ntBASIC1.5□□□□□ -2.17
RTN3O95197 AC120024.3-201ENST00000603167 156 ntBASIC1.5□□□□□ -2.17
RTN3O95197 AC104695.3-201ENST00000604052 296 ntBASIC1.5□□□□□ -2.17
RTN3O95197 7SK.8-201ENST00000612110 250 ntBASIC1.5□□□□□ -2.17
RTN3O95197 MIR6504-201ENST00000613520 61 ntBASIC1.5□□□□□ -2.17
RTN3O95197 7SK.11-201ENST00000615477 250 ntBASIC1.5□□□□□ -2.17
RTN3O95197 MIR376A1-201ENST00000616574 68 ntBASIC1.5□□□□□ -2.17
RTN3O95197 AL591926.4-201ENST00000616895 298 ntBASIC1.5□□□□□ -2.17
RTN3O95197 7SK.13-201ENST00000622040 250 ntBASIC1.5□□□□□ -2.17
RTN3O95197 AC027279.3-201ENST00000625055 122 ntBASIC1.5□□□□□ -2.17
RTN3O95197 RNU6-833P-201ENST00000363486 107 ntBASIC1.49□□□□□ -2.17
RTN3O95197 RNU6-450P-201ENST00000364654 107 ntBASIC1.49□□□□□ -2.17
RTN3O95197 Y_RNA.383-201ENST00000383855 97 ntBASIC1.49□□□□□ -2.17
RTN3O95197 SNORA22B-201ENST00000383876 138 ntBASIC1.49□□□□□ -2.17
RTN3O95197 RNU6-1323P-201ENST00000384025 107 ntBASIC1.49□□□□□ -2.17
RTN3O95197 MIR1252-201ENST00000408861 65 ntBASIC1.49□□□□□ -2.17
RTN3O95197 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.49□□□□□ -2.17
RTN3O95197 POLR2KP2-201ENST00000438155 177 ntBASIC1.49□□□□□ -2.17
RTN3O95197 AC093850.1-201ENST00000454121 251 ntBASIC1.49□□□□□ -2.17
RTN3O95197 HMGN1P10-201ENST00000474557 553 ntBASIC1.49□□□□□ -2.17
RTN3O95197 RNU6-397P-201ENST00000516226 104 ntBASIC1.49□□□□□ -2.17
RTN3O95197 RNU6-1046P-201ENST00000516538 107 ntBASIC1.49□□□□□ -2.17
RTN3O95197 RNU6-922P-201ENST00000516753 99 ntBASIC1.49□□□□□ -2.17
RTN3O95197 AC008269.2-201ENST00000561915 1105 ntBASIC1.49□□□□□ -2.17
RTN3O95197 MIR4421-201ENST00000578133 69 ntBASIC1.49□□□□□ -2.17
RTN3O95197 MIR4762-201ENST00000585261 75 ntBASIC1.49□□□□□ -2.17
RTN3O95197 AC068647.2-201ENST00000637380 353 ntBASIC1.49□□□□□ -2.17
RTN3O95197 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
RTN3O95197 Y_RNA.253-201ENST00000364562 112 ntBASIC1.48□□□□□ -2.17
RTN3O95197 SNORA2.2-201ENST00000365473 135 ntBASIC1.48□□□□□ -2.17
RTN3O95197 Y_RNA.380-201ENST00000365663 111 ntBASIC1.48□□□□□ -2.17
RTN3O95197 RNU6-163P-201ENST00000384396 106 ntBASIC1.48□□□□□ -2.17
RTN3O95197 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.48□□□□□ -2.17
RTN3O95197 AL451046.2-201ENST00000403074 277 ntBASIC1.48□□□□□ -2.17
RTN3O95197 AL590004.1-201ENST00000405321 300 ntBASIC1.48□□□□□ -2.17
RTN3O95197 MIR3145-201ENST00000580727 82 ntBASIC1.48□□□□□ -2.17
RTN3O95197 MIR4300-201ENST00000581016 96 ntBASIC1.48□□□□□ -2.17
RTN3O95197 GHRLOS.1-201ENST00000610995 70 ntBASIC1.48□□□□□ -2.17
RTN3O95197 MIR8065-201ENST00000620577 100 ntBASIC1.48□□□□□ -2.17
RTN3O95197 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms