Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 Y_RNA.485-201ENST00000384395 102 ntBASIC1.3□□□□□ -2.2
BEST1O76090 Y_RNA.551-201ENST00000384661 102 ntBASIC1.3□□□□□ -2.2
BEST1O76090 RPL39P39-201ENST00000455840 151 ntBASIC1.3□□□□□ -2.2
BEST1O76090 RNU7-110P-201ENST00000516891 62 ntBASIC1.3□□□□□ -2.2
BEST1O76090 RNU7-116P-201ENST00000516940 62 ntBASIC1.3□□□□□ -2.2
BEST1O76090 RNU6-1116P-201ENST00000517269 99 ntBASIC1.3□□□□□ -2.2
BEST1O76090 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
BEST1O76090 AC040926.1-201ENST00000530195 238 ntBASIC1.3□□□□□ -2.2
BEST1O76090 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
BEST1O76090 Y_RNA.368-201ENST00000365547 113 ntBASIC1.29□□□□□ -2.2
BEST1O76090 Y_RNA.456-201ENST00000384232 111 ntBASIC1.29□□□□□ -2.2
BEST1O76090 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
BEST1O76090 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
BEST1O76090 MIR452-201ENST00000385020 85 ntBASIC1.29□□□□□ -2.2
BEST1O76090 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
BEST1O76090 MTND1P14-201ENST00000427400 950 ntBASIC1.29□□□□□ -2.2
BEST1O76090 AC104332.1-201ENST00000440471 797 ntBASIC1.29□□□□□ -2.2
BEST1O76090 AC092473.1-201ENST00000441098 221 ntBASIC1.29□□□□□ -2.2
BEST1O76090 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.29□□□□□ -2.2
BEST1O76090 SNORA25.10-201ENST00000515926 124 ntBASIC1.29□□□□□ -2.2
BEST1O76090 SNORA31.4-201ENST00000516049 129 ntBASIC1.29□□□□□ -2.2
BEST1O76090 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
BEST1O76090 Y_RNA.253-201ENST00000364562 112 ntBASIC1.28□□□□□ -2.2
BEST1O76090 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
BEST1O76090 Y_RNA.310-201ENST00000365063 113 ntBASIC1.28□□□□□ -2.2
BEST1O76090 Y_RNA.341-201ENST00000365341 102 ntBASIC1.28□□□□□ -2.2
BEST1O76090 Y_RNA.471-201ENST00000384312 102 ntBASIC1.28□□□□□ -2.2
BEST1O76090 PIGPP3-201ENST00000425307 415 ntBASIC1.28□□□□□ -2.2
BEST1O76090 AC114811.1-201ENST00000507207 168 ntBASIC1.28□□□□□ -2.2
BEST1O76090 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.28□□□□□ -2.2
BEST1O76090 Y_RNA.714-201ENST00000517065 90 ntBASIC1.28□□□□□ -2.2
BEST1O76090 SNORA70.22-201ENST00000517160 124 ntBASIC1.28□□□□□ -2.2
BEST1O76090 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
BEST1O76090 MIR4781-201ENST00000585250 76 ntBASIC1.28□□□□□ -2.2
BEST1O76090 AL022345.2-201ENST00000606307 135 ntBASIC1.28□□□□□ -2.2
BEST1O76090 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.28□□□□□ -2.2
BEST1O76090 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
BEST1O76090 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
BEST1O76090 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
BEST1O76090 SNORD81.1-201ENST00000363064 77 ntBASIC1.27□□□□□ -2.21
BEST1O76090 Y_RNA.164-201ENST00000363709 102 ntBASIC1.27□□□□□ -2.21
BEST1O76090 Y_RNA.424-201ENST00000384063 103 ntBASIC1.27□□□□□ -2.21
BEST1O76090 RNU6-21P-201ENST00000384710 107 ntBASIC1.27□□□□□ -2.21
BEST1O76090 MIR522-201ENST00000385071 87 ntBASIC1.27□□□□□ -2.21
BEST1O76090 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
BEST1O76090 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.27□□□□□ -2.21
BEST1O76090 LINC01399-202ENST00000458450 244 ntBASIC1.27□□□□□ -2.21
BEST1O76090 Y_RNA.639-201ENST00000458981 102 ntBASIC1.27□□□□□ -2.21
BEST1O76090 HMGN1P7-201ENST00000491722 313 ntBASIC1.27□□□□□ -2.21
BEST1O76090 AL133373.1-201ENST00000497098 94 ntBASIC1.27□□□□□ -2.21
BEST1O76090 FAM106DP-201ENST00000586416 501 ntBASIC1.27□□□□□ -2.21
BEST1O76090 AC090971.5-201ENST00000621102 293 ntBASIC1.27□□□□□ -2.21
BEST1O76090 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
BEST1O76090 Y_RNA.143-201ENST00000363520 106 ntBASIC1.26□□□□□ -2.21
BEST1O76090 SNORD42.2-201ENST00000365570 69 ntBASIC1.26□□□□□ -2.21
BEST1O76090 SNORA70.7-201ENST00000384159 133 ntBASIC1.26□□□□□ -2.21
BEST1O76090 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.26□□□□□ -2.21
BEST1O76090 SNORA31.2-201ENST00000516019 134 ntBASIC1.26□□□□□ -2.21
BEST1O76090 SNORD116-28-201ENST00000516123 91 ntBASIC1.26□□□□□ -2.21
BEST1O76090 RNU6-947P-201ENST00000516264 106 ntBASIC1.26□□□□□ -2.21
BEST1O76090 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
BEST1O76090 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
BEST1O76090 DEFB117-201ENST00000602356 141 ntBASIC1.26□□□□□ -2.21
BEST1O76090 BX284668.6-201ENST00000606899 438 ntBASIC1.26□□□□□ -2.21
BEST1O76090 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.26□□□□□ -2.21
BEST1O76090 AC007485.1-201ENST00000616755 206 ntBASIC1.26□□□□□ -2.21
BEST1O76090 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
BEST1O76090 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.26□□□□□ -2.21
BEST1O76090 AC091812.1-201ENST00000432235 1948 ntBASIC1.26□□□□□ -2.21
BEST1O76090 Y_RNA.336-201ENST00000365307 109 ntBASIC1.25□□□□□ -2.21
BEST1O76090 SNORA63.7-201ENST00000365579 123 ntBASIC1.25□□□□□ -2.21
BEST1O76090 RNU6-937P-201ENST00000384325 106 ntBASIC1.25□□□□□ -2.21
BEST1O76090 MIR526A1-201ENST00000384897 85 ntBASIC1.25□□□□□ -2.21
BEST1O76090 AC245047.7-201ENST00000440265 293 ntBASIC1.25□□□□□ -2.21
BEST1O76090 MTND4P19-201ENST00000446659 478 ntBASIC1.25□□□□□ -2.21
BEST1O76090 HMGN1P10-201ENST00000474557 553 ntBASIC1.25□□□□□ -2.21
BEST1O76090 SEPT14P8-201ENST00000508026 178 ntBASIC1.25□□□□□ -2.21
BEST1O76090 POLR3GP1-201ENST00000594073 261 ntBASIC1.25□□□□□ -2.21
BEST1O76090 SNORD113-5-201ENST00000607261 78 ntBASIC1.25□□□□□ -2.21
BEST1O76090 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
BEST1O76090 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
BEST1O76090 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
BEST1O76090 RNU6-1084P-201ENST00000362498 107 ntBASIC1.24□□□□□ -2.21
BEST1O76090 RNU6-1248P-201ENST00000391096 64 ntBASIC1.24□□□□□ -2.21
BEST1O76090 MIR1298-201ENST00000408783 112 ntBASIC1.24□□□□□ -2.21
BEST1O76090 MLLT10P1-201ENST00000418346 262 ntBASIC1.24□□□□□ -2.21
BEST1O76090 AC048334.1-201ENST00000477975 159 ntBASIC1.24□□□□□ -2.21
BEST1O76090 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.24□□□□□ -2.21
BEST1O76090 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
BEST1O76090 AP003357.1-201ENST00000604497 148 ntBASIC1.24□□□□□ -2.21
BEST1O76090 AC007742.2-201ENST00000618226 398 ntBASIC1.24□□□□□ -2.21
BEST1O76090 AC091895.1-201ENST00000624494 256 ntBASIC1.24□□□□□ -2.21
BEST1O76090 MIR369-201ENST00000362155 70 ntBASIC1.23□□□□□ -2.21
BEST1O76090 snoU2-30.1-201ENST00000365012 70 ntBASIC1.23□□□□□ -2.21
BEST1O76090 AC117470.1-201ENST00000381974 330 ntBASIC1.23□□□□□ -2.21
BEST1O76090 Y_RNA.419-201ENST00000384041 102 ntBASIC1.23□□□□□ -2.21
BEST1O76090 Y_RNA.509-201ENST00000384506 99 ntBASIC1.23□□□□□ -2.21
BEST1O76090 MIR222-201ENST00000384992 110 ntBASIC1.23□□□□□ -2.21
BEST1O76090 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
BEST1O76090 RNU6-131P-201ENST00000391144 107 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms