Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MTND3P21-201ENST00000433774 331 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 MTND3P10-201ENST00000450967 341 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 RNU6-229P-201ENST00000516614 102 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 Y_RNA.708-201ENST00000516950 96 ntBASIC0.26□□□□□ -2.37
UPK1BO75841 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 RNU6-369P-201ENST00000362515 102 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 RNU6-324P-201ENST00000363957 106 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 RPL30P15-201ENST00000457129 321 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 MIR2053-201ENST00000459295 91 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 snoU13.21-201ENST00000459368 105 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 NDUFA4P2-201ENST00000489989 244 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 AC011352.1-201ENST00000512300 793 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 AC022616.4-201ENST00000522985 181 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 MIR6504-201ENST00000613520 61 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 AC240442.1-201ENST00000616055 283 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 AC092794.2-201ENST00000620933 563 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 MIR5087-201ENST00000635826 76 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 AL442644.1-201ENST00000454390 3105 ntBASIC0.25□□□□□ -2.37
UPK1BO75841 RNU6-99P-201ENST00000364721 107 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 RNU6-767P-201ENST00000384132 107 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 RNU6-601P-201ENST00000384540 107 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 MIR573-201ENST00000384964 99 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 MIR520H-201ENST00000385126 88 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 MIR548K-201ENST00000408406 116 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 RNA5SP118-201ENST00000410385 109 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 AC015818.7-201ENST00000428754 109 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 AC087499.7-201ENST00000441958 109 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 MTND2P22-201ENST00000444325 1033 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 RPS29P1-201ENST00000465274 159 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 RNU6-966P-201ENST00000516479 104 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 MIR2115-201ENST00000516657 100 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 AC024909.2-201ENST00000553035 286 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 AL355375.2-201ENST00000574825 175 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 AL162730.1-201ENST00000605734 292 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 RMST_2.1-201ENST00000617263 136 ntBASIC0.24□□□□□ -2.37
UPK1BO75841 Y_RNA.168-201ENST00000363740 102 ntBASIC0.23□□□□□ -2.37
UPK1BO75841 RNU2-54P-201ENST00000410299 190 ntBASIC0.23□□□□□ -2.37
UPK1BO75841 CHEK2P4-201ENST00000450340 246 ntBASIC0.23□□□□□ -2.37
UPK1BO75841 RPL17P19-201ENST00000489069 552 ntBASIC0.23□□□□□ -2.37
UPK1BO75841 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.23□□□□□ -2.37
UPK1BO75841 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
UPK1BO75841 AL512605.2-201ENST00000592972 256 ntBASIC0.23□□□□□ -2.37
UPK1BO75841 AC091925.1-201ENST00000623204 462 ntBASIC0.23□□□□□ -2.37
UPK1BO75841 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.23□□□□□ -2.37
UPK1BO75841 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.23□□□□□ -2.37
UPK1BO75841 Y_RNA.191-201ENST00000363972 113 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 SNORD14E-201ENST00000364009 85 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 RNU6-593P-201ENST00000364716 112 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 SNORA72-201ENST00000384339 132 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 MIR520F-201ENST00000384824 87 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 RNU6-1199P-201ENST00000411249 104 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 SNORD83.1-201ENST00000411362 77 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 AC098934.3-201ENST00000430450 190 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 RPS29P25-201ENST00000481709 171 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.22□□□□□ -2.37
UPK1BO75841 RNU6-120P-201ENST00000516077 103 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 RNU6-155P-201ENST00000516347 100 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 Y_RNA.714-201ENST00000517065 90 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 MIR548AO-201ENST00000579992 96 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.22□□□□□ -2.37
UPK1BO75841 MIR6788-201ENST00000618842 66 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 AC015726.2-201ENST00000620112 122 ntBASIC0.22□□□□□ -2.37
UPK1BO75841 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.22□□□□□ -2.37
UPK1BO75841 MIR18A-201ENST00000362310 71 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 RNU6-396P-201ENST00000365369 105 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 RNU6-205P-201ENST00000390858 107 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 MIR548J-201ENST00000408833 112 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 MTND4P28-201ENST00000426217 387 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 MTCO3P10-201ENST00000455912 772 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.21□□□□□ -2.38
UPK1BO75841 RNU6-436P-201ENST00000516171 114 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 RNU6-977P-201ENST00000516411 103 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.21□□□□□ -2.38
UPK1BO75841 MIR5000-201ENST00000577717 103 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 MIR4452-201ENST00000583004 71 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 AC005176.2-201ENST00000596933 147 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 PISRT1.1-201ENST00000616930 107 ntBASIC0.21□□□□□ -2.38
UPK1BO75841 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 SNORD45.3-201ENST00000363836 72 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 Y_RNA.446-201ENST00000384178 104 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 SNORD38C-201ENST00000384381 69 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 RNU6-342P-201ENST00000384521 104 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 Y_RNA.573-201ENST00000384763 105 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.2□□□□□ -2.38
UPK1BO75841 HMGN1P10-201ENST00000474557 553 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 RNU6-1213P-201ENST00000517075 94 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 MIR2355-201ENST00000517199 87 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 MIR3612-201ENST00000579753 87 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 AC060780.3-201ENST00000589464 80 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 AC087588.2-201ENST00000617667 426 ntBASIC0.2□□□□□ -2.38
UPK1BO75841 RNU6-934P-201ENST00000365154 107 ntBASIC0.19□□□□□ -2.38
UPK1BO75841 RNU6-20P-201ENST00000384106 107 ntBASIC0.19□□□□□ -2.38
UPK1BO75841 Y_RNA.453-201ENST00000384223 109 ntBASIC0.19□□□□□ -2.38
UPK1BO75841 RNU6-192P-201ENST00000391253 100 ntBASIC0.19□□□□□ -2.38
UPK1BO75841 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.19□□□□□ -2.38
UPK1BO75841 AC107399.1-201ENST00000451226 265 ntBASIC0.19□□□□□ -2.38
UPK1BO75841 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.19□□□□□ -2.38
UPK1BO75841 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.19□□□□□ -2.38
UPK1BO75841 RNU7-181P-201ENST00000517234 74 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms