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Protein–RNA interactions for Protein: O75056
SDC3, Syndecan-3, human
Predictions only
Length
442 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SDC3
O75056
RNU6-976P-201
ENST00000516086
111 nt
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
RNU6-966P-201
ENST00000516479
104 nt
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
SNORA40.14-201
ENST00000516543
86 nt
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
SNORA70.22-201
ENST00000517160
124 nt
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
AC100807.1-201
ENST00000517640
552 nt
TSL 5
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
AC093027.1-201
ENST00000546698
429 nt
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
MIR4762-201
ENST00000585261
75 nt
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
AL117336.2-201
ENST00000602435
335 nt
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
SNORD114-21-201
ENST00000606412
72 nt
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
AC004832.4-201
ENST00000608952
331 nt
BASIC
1.04
□□□□□ -2.24
SDC3
O75056
SLC25A46-204
ENST00000504098
2345 nt
TSL 5
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
Y_RNA.5-201
ENST00000362334
102 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
Y_RNA.39-201
ENST00000362620
98 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
U8.5-201
ENST00000364528
136 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
SNORA22-201
ENST00000383907
134 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
SNORA70.7-201
ENST00000384159
133 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
SNORD116-13-201
ENST00000384408
92 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
SNORA22C-201
ENST00000384614
134 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
TRAJ3-201
ENST00000390534
62 nt
APPRIS P1
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
AL390729.2-201
ENST00000416137
156 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
MCFD2P1-201
ENST00000417812
300 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
AL591704.2-201
ENST00000421658
181 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
CYCTP-201
ENST00000504253
315 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
RNU6-947P-201
ENST00000516264
106 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
RNU4-77P-201
ENST00000516692
156 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
MIR5188-201
ENST00000583467
113 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
AC092447.9-201
ENST00000603395
144 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
AL357312.1-201
ENST00000603879
298 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
DLEU2_2.2-201
ENST00000615474
90 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
AL606534.2-204
ENST00000635008
178 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
AC112487.2-201
ENST00000637950
304 nt
BASIC
1.03
□□□□□ -2.24
SDC3
O75056
RNU6-324P-201
ENST00000363957
106 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
RNU6-1175P-201
ENST00000365200
107 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
RNU6-1105P-201
ENST00000384774
107 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
RPEP5-201
ENST00000441137
268 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
RPS29P28-201
ENST00000446439
141 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
AC005042.3-201
ENST00000453230
174 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
U8.19-201
ENST00000459095
133 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
MTND3P22-201
ENST00000510932
243 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
SNORD116-28-201
ENST00000516123
91 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
RNU6-1223P-201
ENST00000517124
104 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
AP001178.1-201
ENST00000584679
268 nt
TSL 3
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
AC120024.3-201
ENST00000603167
156 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
LARP7P1-201
ENST00000605576
316 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
AL121655.1-201
ENST00000605811
308 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
AC104985.2-201
ENST00000620598
500 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
LINC01068-202
ENST00000620874
626 nt
TSL 3
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
AC027335.2-201
ENST00000624030
375 nt
BASIC
1.02
□□□□□ -2.25
SDC3
O75056
Y_RNA.172-201
ENST00000363765
102 nt
BASIC
1.01
□□□□□ -2.25
SDC3
O75056
MT-TD-201
ENST00000387419
68 nt
BASIC
1.01
□□□□□ -2.25
SDC3
O75056
MIR891A-201
ENST00000401237
79 nt
BASIC
1.01
□□□□□ -2.25
SDC3
O75056
RNU6-710P-201
ENST00000410424
105 nt
BASIC
1.01
□□□□□ -2.25
SDC3
O75056
SNORA31.2-201
ENST00000516019
134 nt
BASIC
1.01
□□□□□ -2.25
SDC3
O75056
AC005972.2-201
ENST00000604690
348 nt
BASIC
1.01
□□□□□ -2.25
SDC3
O75056
Y_RNA.772-201
ENST00000606692
102 nt
BASIC
1.01
□□□□□ -2.25
SDC3
O75056
AL591926.4-201
ENST00000616895
298 nt
BASIC
1.01
□□□□□ -2.25
SDC3
O75056
RNU1-124P-201
ENST00000363861
145 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
Y_RNA.458-201
ENST00000384240
102 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
RNU6-910P-201
ENST00000390844
107 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
RNU6ATAC20P-201
ENST00000408436
127 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
AL360175.1-201
ENST00000426547
285 nt
TSL 5
BASIC
1
□□□□□ -2.25
SDC3
O75056
AL160004.2-201
ENST00000432935
350 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
RPS20P10-201
ENST00000451209
253 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
SNORA31.4-201
ENST00000516049
129 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
RNU6-475P-201
ENST00000516073
104 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
RNU6-1116P-201
ENST00000517269
99 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
SNORD58B-201
ENST00000607313
66 nt
BASIC
1
□□□□□ -2.25
SDC3
O75056
PTPN22-203
ENST00000460620
1794 nt
TSL 1 (best)
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
RNU4-79P-201
ENST00000362764
141 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
Y_RNA.58-201
ENST00000362807
102 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
RNU4-73P-201
ENST00000363164
141 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
Y_RNA.154-201
ENST00000363624
102 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
RNY3P1-201
ENST00000365085
102 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
Y_RNA.315-201
ENST00000365117
102 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
Y_RNA.329-201
ENST00000365209
107 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
Y_RNA.354-201
ENST00000365448
111 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
RNY3-201
ENST00000365484
102 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
SNORA72-201
ENST00000384339
132 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
RNU6-163P-201
ENST00000384396
106 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
Y_RNA.526-201
ENST00000384572
110 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
MIR526A1-201
ENST00000384897
85 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
AL353747.2-201
ENST00000439207
205 nt
TSL 3
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
AC245047.7-201
ENST00000440265
293 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
SNORA25.10-201
ENST00000515926
124 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
Y_RNA.661-201
ENST00000516003
99 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
Y_RNA.713-201
ENST00000517013
96 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
AC104211.3-201
ENST00000518861
270 nt
TSL 3
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
RPS29P30-201
ENST00000600975
111 nt
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
ZNF415-224
ENST00000601493
2132 nt
TSL 1 (best)
BASIC
0.99
□□□□□ -2.25
SDC3
O75056
SNORD68-201
ENST00000363214
84 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
Y_RNA.112-201
ENST00000363250
102 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
Y_RNA.197-201
ENST00000364004
102 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
RNU4-38P-201
ENST00000364472
129 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
RNU6-1323P-201
ENST00000384025
107 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
SNORD63-201
ENST00000384262
68 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
Y_RNA.621-201
ENST00000411065
96 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
AC104332.1-201
ENST00000440471
797 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
AC069023.1-201
ENST00000442231
221 nt
TSL 3
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
AC048334.1-201
ENST00000477975
159 nt
BASIC
0.98
□□□□□ -2.25
SDC3
O75056
PNRC2-204
ENST00000579103
171 nt
TSL 2
BASIC
0.98
□□□□□ -2.25
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Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms