Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 MIR5087-201ENST00000635826 76 ntBASIC0.58□□□□□ -2.32
SMPD2O60906 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SMPD2O60906 Y_RNA.115-201ENST00000363272 98 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 Y_RNA.370-201ENST00000365589 108 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 Y_RNA.453-201ENST00000384223 109 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 Y_RNA.554-201ENST00000384672 102 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 MIR522-201ENST00000385071 87 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 MIR516B2-201ENST00000385190 85 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.57□□□□□ -2.32
SMPD2O60906 AL353997.1-201ENST00000432936 108 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 MTND1P4-201ENST00000435196 415 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.57□□□□□ -2.32
SMPD2O60906 RN7SKP164-201ENST00000516138 266 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 SNORD45.4-201ENST00000516629 73 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.57□□□□□ -2.32
SMPD2O60906 AC018638.8-201ENST00000588755 281 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 AC004467.1-201ENST00000615678 330 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 PISRT1.1-201ENST00000616930 107 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 AC092794.2-201ENST00000620933 563 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 7SK.10-201ENST00000621414 298 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 AC243829.3-201ENST00000622177 108 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 AL589743.1-201ENST00000551932 2712 ntBASIC0.57□□□□□ -2.32
SMPD2O60906 SNORA25.3-201ENST00000363205 127 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 SNORD113.3-201ENST00000364630 78 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 AC107399.1-201ENST00000451226 265 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 RNU6-408P-201ENST00000515910 100 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 RNU7-41P-201ENST00000515917 61 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 SNORA18.7-201ENST00000516910 131 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 AC009229.3-201ENST00000608056 282 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 AC023934.1-201ENST00000574529 2389 ntBASIC0.56□□□□□ -2.32
SMPD2O60906 RNU6-1335P-201ENST00000365426 107 ntBASIC0.55□□□□□ -2.32
SMPD2O60906 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.55□□□□□ -2.32
SMPD2O60906 RNU6-994P-201ENST00000410507 111 ntBASIC0.55□□□□□ -2.32
SMPD2O60906 RPS3AP52-201ENST00000435639 297 ntBASIC0.55□□□□□ -2.32
SMPD2O60906 AC116353.2-201ENST00000505332 712 ntBASIC0.55□□□□□ -2.32
SMPD2O60906 AC036111.3-201ENST00000526389 112 ntBASIC0.55□□□□□ -2.32
SMPD2O60906 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.55□□□□□ -2.32
SMPD2O60906 Y_RNA.85-201ENST00000363014 111 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 RNU6-623P-201ENST00000363143 105 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 Y_RNA.253-201ENST00000364562 112 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 RNU6-1297P-201ENST00000384415 104 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 RNU6-601P-201ENST00000384540 107 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 RNU1-119P-201ENST00000391122 165 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 AL031003.1-201ENST00000404229 172 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 RNU2-54P-201ENST00000410299 190 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.54□□□□□ -2.32
SMPD2O60906 SNORD123-201ENST00000459473 70 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 AC092989.1-201ENST00000481235 277 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.54□□□□□ -2.32
SMPD2O60906 AF235103.2-201ENST00000525753 346 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 MIR8087-201ENST00000612745 78 ntBASIC0.54□□□□□ -2.32
SMPD2O60906 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
SMPD2O60906 Y_RNA.251-201ENST00000364551 99 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 RNU6-131P-201ENST00000391144 107 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 RNU2-61P-201ENST00000411069 191 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 MTND3P8-201ENST00000412909 339 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 MTND4P28-201ENST00000426217 387 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.53□□□□□ -2.32
SMPD2O60906 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.53□□□□□ -2.32
SMPD2O60906 MIR2053-201ENST00000459295 91 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 RNU6-496P-201ENST00000516145 99 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 RNU6-720P-201ENST00000516363 108 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 RNA5SP330-201ENST00000517096 96 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 AC093027.1-201ENST00000546698 429 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 AC005972.2-201ENST00000604690 348 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 MIR3688-2-201ENST00000636963 87 ntBASIC0.53□□□□□ -2.32
SMPD2O60906 RNU4-75P-201ENST00000364621 146 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 RNU6-716P-201ENST00000365621 103 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 SNORA72-201ENST00000384339 132 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 MIR548F5-201ENST00000408421 86 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 RNA5SP193-201ENST00000410353 107 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 MLLT10P1-201ENST00000418346 262 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 AL392103.1-201ENST00000447000 198 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 RNU6-229P-201ENST00000516614 102 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 AC240442.1-201ENST00000616055 283 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 AC091925.1-201ENST00000623204 462 ntBASIC0.52□□□□□ -2.33
SMPD2O60906 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.52□□□□□ -2.33
SMPD2O60906 MIR1827-201ENST00000408549 66 ntBASIC0.51□□□□□ -2.33
SMPD2O60906 AC092628.1-201ENST00000436250 252 ntBASIC0.51□□□□□ -2.33
SMPD2O60906 FCF1P4-201ENST00000448326 183 ntBASIC0.51□□□□□ -2.33
SMPD2O60906 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
SMPD2O60906 AL512605.2-201ENST00000592972 256 ntBASIC0.51□□□□□ -2.33
SMPD2O60906 AC104695.3-201ENST00000604052 296 ntBASIC0.51□□□□□ -2.33
SMPD2O60906 Y_RNA.473-201ENST00000384333 102 ntBASIC0.5□□□□□ -2.33
SMPD2O60906 SNORD105-201ENST00000386910 85 ntBASIC0.5□□□□□ -2.33
SMPD2O60906 SNORA69.1-201ENST00000390904 137 ntBASIC0.5□□□□□ -2.33
SMPD2O60906 AL358176.2-201ENST00000425769 204 ntBASIC0.5□□□□□ -2.33
SMPD2O60906 CHEK2P4-201ENST00000450340 246 ntBASIC0.5□□□□□ -2.33
SMPD2O60906 AC105313.1-201ENST00000509121 353 ntBASIC0.5□□□□□ -2.33
SMPD2O60906 AL109933.3-201ENST00000619095 188 ntBASIC0.5□□□□□ -2.33
SMPD2O60906 MIR4251-201ENST00000635819 61 ntBASIC0.5□□□□□ -2.33
SMPD2O60906 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
SMPD2O60906 MIR1-1-201ENST00000362147 71 ntBASIC0.49□□□□□ -2.33
SMPD2O60906 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
SMPD2O60906 Y_RNA.339-201ENST00000365325 102 ntBASIC0.49□□□□□ -2.33
SMPD2O60906 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
SMPD2O60906 Y_RNA.577-201ENST00000384794 101 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms