Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MTND2P38-201ENST00000522536 667 ntBASIC0.16□□□□□ -2.38
SHOX2O60902 AC100812.1-201ENST00000607622 580 ntBASIC0.16□□□□□ -2.38
SHOX2O60902 U6.115-201ENST00000636045 103 ntBASIC0.16□□□□□ -2.38
SHOX2O60902 AC068137.3-201ENST00000639191 341 ntBASIC0.16□□□□□ -2.38
SHOX2O60902 ZNF299P-201ENST00000406845 1804 ntBASIC0.15□□□□□ -2.38
SHOX2O60902 RNU6-596P-201ENST00000365395 98 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 Y_RNA.405-201ENST00000383979 100 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 Y_RNA.451-201ENST00000384200 100 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 Y_RNA.468-201ENST00000384298 102 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 Y_RNA.524-201ENST00000384564 100 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 SNORA2B-201ENST00000384583 137 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 Y_RNA.561-201ENST00000384694 100 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 MIR938-201ENST00000401216 83 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 RNU6-613P-201ENST00000410412 108 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 ELOCP21-201ENST00000412558 336 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 SNORA18.7-201ENST00000516910 131 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 ZNF519P2-201ENST00000557032 169 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 AL355073.2-201ENST00000612106 557 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 AC015726.2-201ENST00000620112 122 ntBASIC0.15□□□□□ -2.39
SHOX2O60902 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
SHOX2O60902 RNU6-1085P-201ENST00000363576 107 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 RNU6-1104P-201ENST00000384723 104 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.14□□□□□ -2.39
SHOX2O60902 AL590632.1-201ENST00000424289 371 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 HMGN2P22-201ENST00000427588 175 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 HMGN2P32-201ENST00000444648 269 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 ELOCP24-201ENST00000456370 334 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 MIR4273-201ENST00000582824 84 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 AF250324.2-201ENST00000608299 610 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 AL591926.4-201ENST00000616895 298 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 MTND5P32-201ENST00000560711 1802 ntBASIC0.14□□□□□ -2.39
SHOX2O60902 RNU6-595P-201ENST00000363944 107 ntBASIC0.13□□□□□ -2.39
SHOX2O60902 Y_RNA.530-201ENST00000384587 101 ntBASIC0.13□□□□□ -2.39
SHOX2O60902 RNU6-1001P-201ENST00000411265 100 ntBASIC0.13□□□□□ -2.39
SHOX2O60902 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.13□□□□□ -2.39
SHOX2O60902 MIR2115-201ENST00000516657 100 ntBASIC0.13□□□□□ -2.39
SHOX2O60902 MIR3908-201ENST00000579798 126 ntBASIC0.13□□□□□ -2.39
SHOX2O60902 AL355297.3-201ENST00000604082 446 ntBASIC0.13□□□□□ -2.39
SHOX2O60902 AC104260.1-201ENST00000616660 539 ntBASIC0.13□□□□□ -2.39
SHOX2O60902 MIR4251-201ENST00000635819 61 ntBASIC0.13□□□□□ -2.39
SHOX2O60902 Y_RNA.135-201ENST00000363439 95 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 Y_RNA.168-201ENST00000363740 102 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 RNU6-654P-201ENST00000364373 107 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 RNU6V-201ENST00000384105 107 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 RNU6-136P-201ENST00000384663 107 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 Y_RNA.621-201ENST00000411065 96 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 AL354751.2-201ENST00000415471 210 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.12□□□□□ -2.39
SHOX2O60902 SEPT14P3-201ENST00000439401 183 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 AL732372.2-207ENST00000445840 183 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 SEPT14P2-201ENST00000453405 183 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 SNORD123-201ENST00000459473 70 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 SEPT14P4-201ENST00000513445 186 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 Y_RNA.665-201ENST00000516177 98 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 FO082796.1-201ENST00000523795 183 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SHOX2O60902 AC145350.1-201ENST00000567426 208 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 AC087685.1-201ENST00000587507 141 ntBASIC0.12□□□□□ -2.39
SHOX2O60902 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.12□□□□□ -2.39
SHOX2O60902 RNU6-302P-201ENST00000365249 107 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 Y_RNA.373-201ENST00000365600 103 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 Y_RNA.498-201ENST00000384460 102 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 Y_RNA.533-201ENST00000384596 114 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 MIR1302-7-201ENST00000408841 72 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 RNA5SP475-201ENST00000410568 110 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 U8.19-201ENST00000459095 133 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 U8.22-201ENST00000459141 133 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 RNU6-256P-201ENST00000516747 97 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 AC022616.4-201ENST00000522985 181 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 AC125232.2-201ENST00000592457 143 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 AC092634.7-201ENST00000621022 103 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 AC112487.2-201ENST00000637950 304 ntBASIC0.11□□□□□ -2.39
SHOX2O60902 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.11□□□□□ -2.39
SHOX2O60902 MIR18A-201ENST00000362310 71 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 SNORD114-28-201ENST00000363610 72 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 Y_RNA.372-201ENST00000365599 102 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 Y_RNA.376-201ENST00000365638 108 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 Y_RNA.409-201ENST00000383990 98 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 RNU6-1145P-201ENST00000384246 107 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 EIF1P2-201ENST00000428233 350 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.1□□□□□ -2.39
SHOX2O60902 AC141557.1-201ENST00000540982 400 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 AC018448.1-201ENST00000552843 316 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 AL162730.1-201ENST00000605734 292 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 DISC2.1-201ENST00000612827 205 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 MIR3674-201ENST00000636576 68 ntBASIC0.1□□□□□ -2.39
SHOX2O60902 MIR103A1-201ENST00000362165 78 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 MIR411-201ENST00000362239 96 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 RNU6-1084P-201ENST00000362498 107 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 RNU6-1252P-201ENST00000363054 104 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 Y_RNA.106-201ENST00000363189 100 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 RNU6-674P-201ENST00000363831 107 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 Y_RNA.243-201ENST00000364481 109 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 snoU2-30.1-201ENST00000365012 70 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 MIR214-201ENST00000385214 110 ntBASIC0.09□□□□□ -2.4
SHOX2O60902 RNU6-1068P-201ENST00000410958 103 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms