Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 IGKV3-31-201ENST00000523109 329 ntBASIC2.08□□□□□ -2.08
SNX2O60749 AC130289.1-201ENST00000577321 73 ntBASIC2.08□□□□□ -2.08
SNX2O60749 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.08□□□□□ -2.08
SNX2O60749 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.07□□□□□ -2.08
SNX2O60749 Y_RNA.267-201ENST00000364679 109 ntBASIC2.07□□□□□ -2.08
SNX2O60749 SNORA36B-201ENST00000410438 131 ntBASIC2.07□□□□□ -2.08
SNX2O60749 Y_RNA.626-201ENST00000411288 95 ntBASIC2.07□□□□□ -2.08
SNX2O60749 AC069257.2-201ENST00000441819 155 ntBASIC2.07□□□□□ -2.08
SNX2O60749 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.07□□□□□ -2.08
SNX2O60749 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
SNX2O60749 AC008834.1-201ENST00000511612 175 ntBASIC2.07□□□□□ -2.08
SNX2O60749 RNY3P16-201ENST00000516338 101 ntBASIC2.07□□□□□ -2.08
SNX2O60749 AC127455.1-201ENST00000565496 145 ntBASIC2.07□□□□□ -2.08
SNX2O60749 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.07□□□□□ -2.08
SNX2O60749 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
SNX2O60749 AL929325.1-201ENST00000603096 117 ntBASIC2.07□□□□□ -2.08
SNX2O60749 AL365265.1-201ENST00000621045 234 ntBASIC2.07□□□□□ -2.08
SNX2O60749 MIR219B-201ENST00000637023 88 ntBASIC2.07□□□□□ -2.08
SNX2O60749 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
SNX2O60749 RNU6-112P-201ENST00000363599 104 ntBASIC2.06□□□□□ -2.08
SNX2O60749 RNU6-296P-201ENST00000384608 107 ntBASIC2.06□□□□□ -2.08
SNX2O60749 MIR30A-201ENST00000385092 71 ntBASIC2.06□□□□□ -2.08
SNX2O60749 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SNX2O60749 AC108059.2-201ENST00000434626 151 ntBASIC2.06□□□□□ -2.08
SNX2O60749 AL021397.1-201ENST00000451806 248 ntBASIC2.06□□□□□ -2.08
SNX2O60749 AC233266.1-201ENST00000454518 96 ntBASIC2.06□□□□□ -2.08
SNX2O60749 RPL23AP54-201ENST00000495129 419 ntBASIC2.06□□□□□ -2.08
SNX2O60749 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.06□□□□□ -2.08
SNX2O60749 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
SNX2O60749 AC011604.1-201ENST00000545978 196 ntBASIC2.06□□□□□ -2.08
SNX2O60749 AC242852.1-201ENST00000612151 96 ntBASIC2.06□□□□□ -2.08
SNX2O60749 MIR6715A-201ENST00000615929 79 ntBASIC2.06□□□□□ -2.08
SNX2O60749 AC244015.1-201ENST00000622301 99 ntBASIC2.06□□□□□ -2.08
SNX2O60749 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.06□□□□□ -2.08
SNX2O60749 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNX2O60749 RNU6-1205P-201ENST00000363625 106 ntBASIC2.05□□□□□ -2.08
SNX2O60749 SNORA63D-201ENST00000364359 132 ntBASIC2.05□□□□□ -2.08
SNX2O60749 Y_RNA.274-201ENST00000364714 101 ntBASIC2.05□□□□□ -2.08
SNX2O60749 Y_RNA.293-201ENST00000364908 93 ntBASIC2.05□□□□□ -2.08
SNX2O60749 Y_RNA.304-201ENST00000365011 112 ntBASIC2.05□□□□□ -2.08
SNX2O60749 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
SNX2O60749 RNU6-1080P-201ENST00000383982 107 ntBASIC2.05□□□□□ -2.08
SNX2O60749 SNORA72-201ENST00000384339 132 ntBASIC2.05□□□□□ -2.08
SNX2O60749 Y_RNA.572-201ENST00000384757 98 ntBASIC2.05□□□□□ -2.08
SNX2O60749 MIR520A-201ENST00000384862 85 ntBASIC2.05□□□□□ -2.08
SNX2O60749 MIR520G-201ENST00000385064 90 ntBASIC2.05□□□□□ -2.08
SNX2O60749 MIR1298-201ENST00000408783 112 ntBASIC2.05□□□□□ -2.08
SNX2O60749 RNU6-383P-201ENST00000410864 94 ntBASIC2.05□□□□□ -2.08
SNX2O60749 FTH1P12-201ENST00000432137 551 ntBASIC2.05□□□□□ -2.08
SNX2O60749 RPL23AP63-201ENST00000498752 471 ntBASIC2.05□□□□□ -2.08
SNX2O60749 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.05□□□□□ -2.08
SNX2O60749 RNU7-116P-201ENST00000516940 62 ntBASIC2.05□□□□□ -2.08
SNX2O60749 RNU6-341P-201ENST00000516973 96 ntBASIC2.05□□□□□ -2.08
SNX2O60749 RNA5SP437-201ENST00000517249 129 ntBASIC2.05□□□□□ -2.08
SNX2O60749 RNU6-794P-201ENST00000517261 64 ntBASIC2.05□□□□□ -2.08
SNX2O60749 AC012493.3-201ENST00000604494 112 ntBASIC2.05□□□□□ -2.08
SNX2O60749 Y_RNA.783-201ENST00000613546 102 ntBASIC2.05□□□□□ -2.08
SNX2O60749 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNX2O60749 AC100821.1-201ENST00000523153 2479 ntBASIC2.05□□□□□ -2.08
SNX2O60749 SNORA1B-201ENST00000362535 133 ntBASIC2.04□□□□□ -2.08
SNX2O60749 RNU6-653P-201ENST00000363074 106 ntBASIC2.04□□□□□ -2.08
SNX2O60749 Y_RNA.199-201ENST00000364014 102 ntBASIC2.04□□□□□ -2.08
SNX2O60749 Y_RNA.200-201ENST00000364018 102 ntBASIC2.04□□□□□ -2.08
SNX2O60749 SNORA4.2-201ENST00000365313 147 ntBASIC2.04□□□□□ -2.08
SNX2O60749 Y_RNA.515-201ENST00000384535 112 ntBASIC2.04□□□□□ -2.08
SNX2O60749 MIR1278-201ENST00000408753 81 ntBASIC2.04□□□□□ -2.08
SNX2O60749 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.04□□□□□ -2.08
SNX2O60749 snoU13.15-201ENST00000459407 104 ntBASIC2.04□□□□□ -2.08
SNX2O60749 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.04□□□□□ -2.08
SNX2O60749 SNORA31.10-201ENST00000516482 106 ntBASIC2.04□□□□□ -2.08
SNX2O60749 SNORA31.17-201ENST00000516953 127 ntBASIC2.04□□□□□ -2.08
SNX2O60749 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.04□□□□□ -2.08
SNX2O60749 SNORD114-1-201ENST00000362705 72 ntBASIC2.03□□□□□ -2.08
SNX2O60749 RNU6-923P-201ENST00000364753 107 ntBASIC2.03□□□□□ -2.08
SNX2O60749 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
SNX2O60749 MIR934-201ENST00000401241 83 ntBASIC2.03□□□□□ -2.08
SNX2O60749 RNA5SP338-201ENST00000410495 85 ntBASIC2.03□□□□□ -2.08
SNX2O60749 Y_RNA.621-201ENST00000411065 96 ntBASIC2.03□□□□□ -2.08
SNX2O60749 RNU6-847P-201ENST00000411115 108 ntBASIC2.03□□□□□ -2.08
SNX2O60749 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.03□□□□□ -2.08
SNX2O60749 AC245047.3-201ENST00000429428 127 ntBASIC2.03□□□□□ -2.08
SNX2O60749 RNU6-138P-201ENST00000515952 107 ntBASIC2.03□□□□□ -2.08
SNX2O60749 AC100767.1-201ENST00000528178 123 ntBASIC2.03□□□□□ -2.08
SNX2O60749 AC104984.5-201ENST00000586878 94 ntBASIC2.03□□□□□ -2.08
SNX2O60749 MIR8074-201ENST00000615081 81 ntBASIC2.03□□□□□ -2.08
SNX2O60749 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNX2O60749 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SNX2O60749 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SNX2O60749 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SNX2O60749 Y_RNA.83-201ENST00000363005 113 ntBASIC2.02□□□□□ -2.09
SNX2O60749 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SNX2O60749 HSPE1P9-201ENST00000440046 311 ntBASIC2.02□□□□□ -2.09
SNX2O60749 RNU6-437P-201ENST00000459408 95 ntBASIC2.02□□□□□ -2.09
SNX2O60749 RNA5SP481-201ENST00000516814 122 ntBASIC2.02□□□□□ -2.09
SNX2O60749 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.02□□□□□ -2.09
SNX2O60749 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SNX2O60749 Y_RNA.24-201ENST00000362508 103 ntBASIC2.01□□□□□ -2.09
SNX2O60749 Y_RNA.262-201ENST00000364641 102 ntBASIC2.01□□□□□ -2.09
SNX2O60749 RNU6-200P-201ENST00000364743 107 ntBASIC2.01□□□□□ -2.09
SNX2O60749 Y_RNA.308-201ENST00000365043 101 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms