Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
RNF13O43567 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
RNF13O43567 SNORD50B-201ENST00000364995 70 ntBASIC0.29□□□□□ -2.36
RNF13O43567 MIR573-201ENST00000384964 99 ntBASIC0.29□□□□□ -2.36
RNF13O43567 RNU6-1050P-201ENST00000410388 107 ntBASIC0.29□□□□□ -2.36
RNF13O43567 RNU2-61P-201ENST00000411069 191 ntBASIC0.29□□□□□ -2.36
RNF13O43567 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.29□□□□□ -2.36
RNF13O43567 RNU6-329P-201ENST00000459618 107 ntBASIC0.29□□□□□ -2.36
RNF13O43567 RNU6-408P-201ENST00000515910 100 ntBASIC0.29□□□□□ -2.36
RNF13O43567 AL355375.2-201ENST00000574825 175 ntBASIC0.29□□□□□ -2.36
RNF13O43567 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.29□□□□□ -2.36
RNF13O43567 RNU4-45P-201ENST00000365469 141 ntBASIC0.28□□□□□ -2.36
RNF13O43567 SNORA72-201ENST00000384339 132 ntBASIC0.28□□□□□ -2.36
RNF13O43567 RNU6-1132P-201ENST00000459214 107 ntBASIC0.28□□□□□ -2.36
RNF13O43567 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.28□□□□□ -2.36
RNF13O43567 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.27□□□□□ -2.37
RNF13O43567 Y_RNA.89-201ENST00000363031 102 ntBASIC0.27□□□□□ -2.37
RNF13O43567 RNU6-396P-201ENST00000365369 105 ntBASIC0.27□□□□□ -2.37
RNF13O43567 Y_RNA.473-201ENST00000384333 102 ntBASIC0.27□□□□□ -2.37
RNF13O43567 MIR216A-201ENST00000385063 110 ntBASIC0.27□□□□□ -2.37
RNF13O43567 RNU2-54P-201ENST00000410299 190 ntBASIC0.27□□□□□ -2.37
RNF13O43567 RNA5SP95-201ENST00000410319 137 ntBASIC0.27□□□□□ -2.37
RNF13O43567 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.27□□□□□ -2.37
RNF13O43567 RNU4-49P-201ENST00000516080 140 ntBASIC0.27□□□□□ -2.37
RNF13O43567 Y_RNA.670-201ENST00000516255 105 ntBASIC0.27□□□□□ -2.37
RNF13O43567 Y_RNA.682-201ENST00000516457 100 ntBASIC0.27□□□□□ -2.37
RNF13O43567 Y_RNA.708-201ENST00000516950 96 ntBASIC0.27□□□□□ -2.37
RNF13O43567 AC245505.1-201ENST00000556398 224 ntBASIC0.27□□□□□ -2.37
RNF13O43567 MIR548AR-201ENST00000582191 57 ntBASIC0.27□□□□□ -2.37
RNF13O43567 AC018638.8-201ENST00000588755 281 ntBASIC0.27□□□□□ -2.37
RNF13O43567 AC005972.2-201ENST00000604690 348 ntBASIC0.27□□□□□ -2.37
RNF13O43567 AC240442.1-201ENST00000616055 283 ntBASIC0.27□□□□□ -2.37
RNF13O43567 Y_RNA.41-201ENST00000362646 102 ntBASIC0.26□□□□□ -2.37
RNF13O43567 Y_RNA.368-201ENST00000365547 113 ntBASIC0.26□□□□□ -2.37
RNF13O43567 Y_RNA.376-201ENST00000365638 108 ntBASIC0.26□□□□□ -2.37
RNF13O43567 Y_RNA.573-201ENST00000384763 105 ntBASIC0.26□□□□□ -2.37
RNF13O43567 MIR936-201ENST00000401264 98 ntBASIC0.26□□□□□ -2.37
RNF13O43567 MIR1287-201ENST00000408492 90 ntBASIC0.26□□□□□ -2.37
RNF13O43567 SNRPGP10-201ENST00000432323 225 ntBASIC0.26□□□□□ -2.37
RNF13O43567 CHEK2P4-201ENST00000450340 246 ntBASIC0.26□□□□□ -2.37
RNF13O43567 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
RNF13O43567 AC024909.2-201ENST00000553035 286 ntBASIC0.26□□□□□ -2.37
RNF13O43567 AC055872.1-201ENST00000570978 278 ntBASIC0.26□□□□□ -2.37
RNF13O43567 MIR4711-201ENST00000578274 70 ntBASIC0.26□□□□□ -2.37
RNF13O43567 AC005899.2-201ENST00000584353 90 ntBASIC0.26□□□□□ -2.37
RNF13O43567 AC015540.1-201ENST00000615828 501 ntBASIC0.26□□□□□ -2.37
RNF13O43567 RMST_2.1-201ENST00000617263 136 ntBASIC0.26□□□□□ -2.37
RNF13O43567 AC015726.2-201ENST00000620112 122 ntBASIC0.26□□□□□ -2.37
RNF13O43567 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.26□□□□□ -2.37
RNF13O43567 MIR377-201ENST00000362145 69 ntBASIC0.25□□□□□ -2.37
RNF13O43567 RNU6-369P-201ENST00000362515 102 ntBASIC0.25□□□□□ -2.37
RNF13O43567 RNU6-961P-201ENST00000363893 105 ntBASIC0.25□□□□□ -2.37
RNF13O43567 RNU6-1327P-201ENST00000365302 105 ntBASIC0.25□□□□□ -2.37
RNF13O43567 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
RNF13O43567 SNORD38C-201ENST00000384381 69 ntBASIC0.25□□□□□ -2.37
RNF13O43567 SNORD28B-201ENST00000390993 75 ntBASIC0.25□□□□□ -2.37
RNF13O43567 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.25□□□□□ -2.37
RNF13O43567 AC011352.1-201ENST00000512300 793 ntBASIC0.25□□□□□ -2.37
RNF13O43567 AC007742.2-201ENST00000618226 398 ntBASIC0.25□□□□□ -2.37
RNF13O43567 Y_RNA.148-201ENST00000363557 117 ntBASIC0.24□□□□□ -2.37
RNF13O43567 Y_RNA.172-201ENST00000363765 102 ntBASIC0.24□□□□□ -2.37
RNF13O43567 SNORD14E-201ENST00000364009 85 ntBASIC0.24□□□□□ -2.37
RNF13O43567 Y_RNA.226-201ENST00000364337 114 ntBASIC0.24□□□□□ -2.37
RNF13O43567 RNU6-42P-201ENST00000384165 107 ntBASIC0.24□□□□□ -2.37
RNF13O43567 Y_RNA.517-201ENST00000384551 106 ntBASIC0.24□□□□□ -2.37
RNF13O43567 MT-TN-201ENST00000387400 73 ntBASIC0.24□□□□□ -2.37
RNF13O43567 MIR548K-201ENST00000408406 116 ntBASIC0.24□□□□□ -2.37
RNF13O43567 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.24□□□□□ -2.37
RNF13O43567 RPS29P25-201ENST00000481709 171 ntBASIC0.24□□□□□ -2.37
RNF13O43567 RNU6-830P-201ENST00000516353 107 ntBASIC0.24□□□□□ -2.37
RNF13O43567 AC087685.1-201ENST00000587507 141 ntBASIC0.24□□□□□ -2.37
RNF13O43567 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.24□□□□□ -2.37
RNF13O43567 AC092794.2-201ENST00000620933 563 ntBASIC0.24□□□□□ -2.37
RNF13O43567 Y_RNA.101-201ENST00000363154 102 ntBASIC0.23□□□□□ -2.37
RNF13O43567 Y_RNA.194-201ENST00000363985 102 ntBASIC0.23□□□□□ -2.37
RNF13O43567 Y_RNA.238-201ENST00000364441 102 ntBASIC0.23□□□□□ -2.37
RNF13O43567 RNU6-580P-201ENST00000365159 107 ntBASIC0.23□□□□□ -2.37
RNF13O43567 Y_RNA.450-201ENST00000384198 113 ntBASIC0.23□□□□□ -2.37
RNF13O43567 RNY1P14-201ENST00000384426 108 ntBASIC0.23□□□□□ -2.37
RNF13O43567 RNA5SP193-201ENST00000410353 107 ntBASIC0.23□□□□□ -2.37
RNF13O43567 RPL17P19-201ENST00000489069 552 ntBASIC0.23□□□□□ -2.37
RNF13O43567 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
RNF13O43567 RNU6-1012P-201ENST00000516606 109 ntBASIC0.23□□□□□ -2.37
RNF13O43567 RNU6-307P-201ENST00000516743 106 ntBASIC0.23□□□□□ -2.37
RNF13O43567 AC012433.1-201ENST00000588916 398 ntBASIC0.23□□□□□ -2.37
RNF13O43567 MIR18A-201ENST00000362310 71 ntBASIC0.22□□□□□ -2.37
RNF13O43567 MIR520H-201ENST00000385126 88 ntBASIC0.22□□□□□ -2.37
RNF13O43567 MTND4P28-201ENST00000426217 387 ntBASIC0.22□□□□□ -2.37
RNF13O43567 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.22□□□□□ -2.37
RNF13O43567 RPS3AP52-201ENST00000435639 297 ntBASIC0.22□□□□□ -2.37
RNF13O43567 MTCO3P10-201ENST00000455912 772 ntBASIC0.22□□□□□ -2.37
RNF13O43567 RBM11P1-201ENST00000604951 799 ntBASIC0.22□□□□□ -2.37
RNF13O43567 AC103591.3-201ENST00000608684 209 ntBASIC0.22□□□□□ -2.37
RNF13O43567 Y_RNA.295-201ENST00000364918 102 ntBASIC0.21□□□□□ -2.38
RNF13O43567 RNU6-192P-201ENST00000391253 100 ntBASIC0.21□□□□□ -2.38
RNF13O43567 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.21□□□□□ -2.38
RNF13O43567 MIR2053-201ENST00000459295 91 ntBASIC0.21□□□□□ -2.38
RNF13O43567 RNA5SP436-201ENST00000516020 115 ntBASIC0.21□□□□□ -2.38
RNF13O43567 SNORA4-201ENST00000584302 138 ntBASIC0.21□□□□□ -2.38
RNF13O43567 AC060780.3-201ENST00000589464 80 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms