Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MIR190B-201ENST00000401119 79 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 SNORD100-201ENST00000408573 76 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 AL358176.2-201ENST00000425769 204 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 snoU13.21-201ENST00000459368 105 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 SNORA25.10-201ENST00000515926 124 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 MIR3672-201ENST00000584290 82 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 SNORA25.18-201ENST00000607153 114 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 AC024933.1-201ENST00000608472 348 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 DISC2.1-201ENST00000612827 205 ntBASIC-0.12□□□□□ -2.43
SGCEO43556 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
SGCEO43556 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 SNORD14E-201ENST00000364009 85 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 Y_RNA.212-201ENST00000364177 102 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 SNORD116-11-201ENST00000383882 92 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 SNRPGP10-201ENST00000432323 225 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 MIR4264-201ENST00000583520 66 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 AC010525.2-201ENST00000590920 195 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 MIR8087-201ENST00000612745 78 ntBASIC-0.13□□□□□ -2.43
SGCEO43556 SNORD45.3-201ENST00000363836 72 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 MIR938-201ENST00000401216 83 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 MTCO2P33-201ENST00000402100 465 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 SNORA40.9-201ENST00000515895 93 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 RNU6-830P-201ENST00000516353 107 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 MIR3678-201ENST00000578455 94 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 MIR5190-201ENST00000581537 80 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 MIR4305-201ENST00000583252 102 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.14□□□□□ -2.43
SGCEO43556 MIR6863-201ENST00000636112 90 ntBASIC-0.14□□□□□ -2.43
SGCEO43556 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
SGCEO43556 SNORA8.2-201ENST00000384372 139 ntBASIC-0.15□□□□□ -2.43
SGCEO43556 RNU6-306P-201ENST00000384617 107 ntBASIC-0.15□□□□□ -2.43
SGCEO43556 RNU6-205P-201ENST00000390858 107 ntBASIC-0.15□□□□□ -2.43
SGCEO43556 AL353997.1-201ENST00000432936 108 ntBASIC-0.15□□□□□ -2.43
SGCEO43556 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.15□□□□□ -2.43
SGCEO43556 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.15□□□□□ -2.43
SGCEO43556 AC104408.1-201ENST00000605241 170 ntBASIC-0.15□□□□□ -2.43
SGCEO43556 Pinc.1-201ENST00000616452 154 ntBASIC-0.15□□□□□ -2.43
SGCEO43556 uc_338.4-201ENST00000616635 176 ntBASIC-0.15□□□□□ -2.43
SGCEO43556 RNY1P16-201ENST00000363063 111 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 SNORD115-30-201ENST00000364117 82 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 RNU6V-201ENST00000384105 107 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 MIR570-201ENST00000384917 97 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 RNU6-700P-201ENST00000391043 107 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 U8.17-201ENST00000391292 132 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 SNORA75.6-201ENST00000391318 127 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 SEPT7P4-201ENST00000437076 306 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.16□□□□□ -2.44
SGCEO43556 RNU7-87P-201ENST00000459343 62 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 RNU7-66P-201ENST00000459469 62 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.16□□□□□ -2.44
SGCEO43556 SCARNA8-201ENST00000515924 131 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 RNU2-12P-201ENST00000517216 168 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 RPL23AP91-201ENST00000569211 455 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 AC090897.1-201ENST00000580909 226 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 AC005730.3-201ENST00000583067 366 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 AC006380.1-201ENST00000603598 186 ntBASIC-0.16□□□□□ -2.44
SGCEO43556 SNORD114-5-201ENST00000362928 70 ntBASIC-0.17□□□□□ -2.44
SGCEO43556 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.17□□□□□ -2.44
SGCEO43556 SNORA72-201ENST00000384339 132 ntBASIC-0.17□□□□□ -2.44
SGCEO43556 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.17□□□□□ -2.44
SGCEO43556 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
SGCEO43556 MIR1197-201ENST00000408818 88 ntBASIC-0.17□□□□□ -2.44
SGCEO43556 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.17□□□□□ -2.44
SGCEO43556 AL512360.1-201ENST00000555346 234 ntBASIC-0.17□□□□□ -2.44
SGCEO43556 AC005972.2-201ENST00000604690 348 ntBASIC-0.17□□□□□ -2.44
SGCEO43556 AC020891.4-201ENST00000605745 93 ntBASIC-0.17□□□□□ -2.44
SGCEO43556 MTND1P7-201ENST00000632801 297 ntBASIC-0.17□□□□□ -2.44
SGCEO43556 SNORA1.2-201ENST00000365189 134 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 MTCO3P40-201ENST00000392516 676 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 RNU2-59P-201ENST00000410482 191 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 PDCL2P1-201ENST00000419302 352 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 AC015818.7-201ENST00000428754 109 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 AC087499.7-201ENST00000441958 109 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.18□□□□□ -2.44
SGCEO43556 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.18□□□□□ -2.44
SGCEO43556 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.18□□□□□ -2.44
SGCEO43556 MIR5701-3-201ENST00000578890 82 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 MIR5701-1-201ENST00000585138 82 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 AC087685.1-201ENST00000587507 141 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 AL162413.1-201ENST00000603198 110 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 MIR4791-201ENST00000607666 84 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 MIR5701-2-201ENST00000615634 82 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.18□□□□□ -2.44
SGCEO43556 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.18□□□□□ -2.44
SGCEO43556 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-716P-201ENST00000365621 103 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-442P-201ENST00000383968 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-747P-201ENST00000390928 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-241P-201ENST00000391148 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-447P-201ENST00000410293 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-355P-201ENST00000410427 104 ntBASIC-0.19□□□□□ -2.44
SGCEO43556 RNU6-791P-201ENST00000410467 104 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms