Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 RNU6-1056P-201ENST00000383996 107 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 SNORA72.4-201ENST00000384174 132 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 SNORA8.3-201ENST00000384679 139 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 MT-TT-201ENST00000387460 66 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 AL031003.1-201ENST00000404229 172 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 AC006461.1-201ENST00000412637 326 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM38O00635 TOMM22P2-201ENST00000430735 237 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM38O00635 AC245047.8-201ENST00000456455 284 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.36□□□□□ -2.03
TRIM38O00635 RNU2-19P-201ENST00000517288 84 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 IGKV3-31-201ENST00000523109 329 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TRIM38O00635 MIR6129-201ENST00000616087 109 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 TUG1_4.1-201ENST00000619464 181 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 AC012640.5-201ENST00000623897 319 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 MIR4679-1-201ENST00000637619 75 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM38O00635 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.36□□□□□ -2.03
TRIM38O00635 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM38O00635 SNORD115-3-201ENST00000363100 82 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 RNU6-23P-201ENST00000363283 107 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 SNORD87-201ENST00000364849 89 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 Y_RNA.287-201ENST00000364853 94 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 RNU6-1264P-201ENST00000383891 107 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 RNU6-969P-201ENST00000383900 105 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 RNU6-376P-201ENST00000384731 106 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 MIR616-201ENST00000385293 97 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 MIR1283-2-201ENST00000408621 87 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM38O00635 AL353689.1-201ENST00000438895 199 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 IGLV3-17-201ENST00000519099 244 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 MIR4524B-201ENST00000581569 115 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 AC103810.6-201ENST00000606708 136 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 AC011603.4-201ENST00000611325 277 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 snoZ196.1-201ENST00000625269 89 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM38O00635 AC005336.3-201ENST00000623833 2679 ntBASIC2.35□□□□□ -2.03
TRIM38O00635 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM38O00635 RNA5SP493-201ENST00000364115 91 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 RNU6-768P-201ENST00000384683 107 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 AL355497.1-201ENST00000406262 551 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM38O00635 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM38O00635 RNU7-57P-201ENST00000459540 60 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 CYCTP-201ENST00000504253 315 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 AC026436.1-201ENST00000510537 270 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 RNU6-107P-201ENST00000516643 102 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 AC127455.1-201ENST00000565496 145 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 MIR3169-201ENST00000578032 83 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 MIR4769-201ENST00000584126 77 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 Y_RNA.802-201ENST00000614892 130 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 MIR1291-201ENST00000627649 87 ntBASIC2.34□□□□□ -2.03
TRIM38O00635 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM38O00635 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM38O00635 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM38O00635 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM38O00635 Y_RNA.251-201ENST00000364551 99 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 RNU6-643P-201ENST00000384018 107 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 MIR15B-201ENST00000385045 98 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 SNORD37.2-201ENST00000391075 66 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 RNU6-1064P-201ENST00000410626 104 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 AC008134.1-201ENST00000420943 193 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 BX510359.4-201ENST00000423750 193 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 AL121914.1-201ENST00000450188 156 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM38O00635 RNU6-221P-201ENST00000459541 99 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 AC055731.1-201ENST00000474387 401 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 MIR1273D-201ENST00000577266 86 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 AC005786.1-201ENST00000588553 154 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.33□□□□□ -2.04
TRIM38O00635 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.33□□□□□ -2.04
TRIM38O00635 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM38O00635 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRIM38O00635 RNU6-1255P-201ENST00000363434 112 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 Y_RNA.229-201ENST00000364347 113 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 SNORD114-6-201ENST00000364393 72 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 Y_RNA.243-201ENST00000364481 109 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 Y_RNA.294-201ENST00000364916 102 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 Y_RNA.310-201ENST00000365063 113 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 Y_RNA.368-201ENST00000365547 113 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 RNU6-418P-201ENST00000384035 107 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 RNU6-476P-201ENST00000384726 107 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 MIR548B-201ENST00000385247 97 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 MIR526A2-201ENST00000390198 65 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TRIM38O00635 MIR1289-2-201ENST00000408360 111 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 MIR1185-2-201ENST00000408687 86 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 RNU6-588P-201ENST00000410281 105 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 CYCSP49-201ENST00000420810 319 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM38O00635 RNU7-141P-201ENST00000459304 62 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM38O00635 RNU2-56P-201ENST00000516826 190 ntBASIC2.32□□□□□ -2.04
TRIM38O00635 RNA5SP170-201ENST00000517150 101 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms