Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU6-596P-201ENST00000365395 98 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 SNORA51.10-201ENST00000384418 136 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 MTCO2P33-201ENST00000402100 465 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.13□□□□□ -2.43
SDCBPO00560 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 SNRPGP14-201ENST00000435400 219 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 AC116353.2-201ENST00000505332 712 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 RN7SKP298-201ENST00000515950 94 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 AL158211.1-201ENST00000566763 763 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 MIR1273G-201ENST00000577677 100 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 MIR5701-3-201ENST00000578890 82 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 MIR5701-1-201ENST00000585138 82 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 MIR5701-2-201ENST00000615634 82 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 MIR6755-201ENST00000619993 66 ntBASIC-0.13□□□□□ -2.43
SDCBPO00560 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.13□□□□□ -2.43
SDCBPO00560 RNU6-879P-201ENST00000364328 108 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 SNORD116-11-201ENST00000383882 92 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 RNU6-780P-201ENST00000391030 104 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.14□□□□□ -2.43
SDCBPO00560 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.14□□□□□ -2.43
SDCBPO00560 AC091959.1-201ENST00000495857 238 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.14□□□□□ -2.43
SDCBPO00560 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 RNU7-181P-201ENST00000517234 74 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 MIR3678-201ENST00000578455 94 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 MIR3942-201ENST00000585264 109 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 AC018638.8-201ENST00000588755 281 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 MIR4791-201ENST00000607666 84 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 AC023510.2-201ENST00000622162 746 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 MIR371B-201ENST00000638082 66 ntBASIC-0.14□□□□□ -2.43
SDCBPO00560 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.15□□□□□ -2.43
SDCBPO00560 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 RNA5SP63-201ENST00000391225 112 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 U8.17-201ENST00000391292 132 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 PCNPP3-201ENST00000393579 471 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 MIR190B-201ENST00000401119 79 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 MIR938-201ENST00000401216 83 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 AL358176.2-201ENST00000425769 204 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.15□□□□□ -2.43
SDCBPO00560 USP9YP30-201ENST00000430729 455 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 RNU6-956P-201ENST00000458868 103 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 RNU7-102P-201ENST00000458948 62 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 RNU7-87P-201ENST00000459343 62 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.15□□□□□ -2.43
SDCBPO00560 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.15□□□□□ -2.43
SDCBPO00560 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.15□□□□□ -2.43
SDCBPO00560 RNA5SP227-201ENST00000516184 113 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.15□□□□□ -2.43
SDCBPO00560 AC133485.4-201ENST00000561835 220 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 MIR5190-201ENST00000581537 80 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 MIR4264-201ENST00000583520 66 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 AC119751.7-201ENST00000600494 245 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 AP000753.3-201ENST00000604083 169 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 MIR6863-201ENST00000636112 90 ntBASIC-0.15□□□□□ -2.43
SDCBPO00560 RNU6-1085P-201ENST00000363576 107 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 MIR489-201ENST00000384923 84 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.16□□□□□ -2.44
SDCBPO00560 AL031003.1-201ENST00000404229 172 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 RNU2-13P-201ENST00000515909 113 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 RNU6-830P-201ENST00000516353 107 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 AC006380.1-201ENST00000603598 186 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 AC005972.2-201ENST00000604690 348 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 MIR8087-201ENST00000612745 78 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 AC090517.2-201ENST00000614966 680 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 Pinc.1-201ENST00000616452 154 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 uc_338.16-201ENST00000621804 95 ntBASIC-0.16□□□□□ -2.44
SDCBPO00560 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 Y_RNA.530-201ENST00000384587 101 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 MIR613-201ENST00000385248 95 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
SDCBPO00560 RNU2-59P-201ENST00000410482 191 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 RNU2-61P-201ENST00000411069 191 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 AC069271.1-201ENST00000445577 156 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 RNU7-62P-201ENST00000458856 62 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 AC022616.4-201ENST00000522985 181 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 AC005014.2-201ENST00000607795 599 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 AC004467.1-201ENST00000615678 330 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 uc_338.4-201ENST00000616635 176 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 MIR6740-201ENST00000618268 113 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 Z69908.1-201ENST00000622603 247 ntBASIC-0.17□□□□□ -2.44
SDCBPO00560 RNU6-961P-201ENST00000363893 105 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 SNORD14E-201ENST00000364009 85 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 RNU6-268P-201ENST00000364174 107 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 RNU6-767P-201ENST00000384132 107 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 SNORD38C-201ENST00000384381 69 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 RNU6-908P-201ENST00000410160 94 ntBASIC-0.18□□□□□ -2.44
SDCBPO00560 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.18□□□□□ -2.44
SDCBPO00560 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms