Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNU6-324P-201ENST00000363957 106 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 Y_RNA.361-201ENST00000365515 120 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 Y_RNA.370-201ENST00000365589 108 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 RNY1P8-201ENST00000383970 114 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 MIR518E-201ENST00000385252 88 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 RNA5SP95-201ENST00000410319 137 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 RNU6-1050P-201ENST00000410388 107 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 SNRPGP10-201ENST00000432323 225 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 AL392103.1-201ENST00000447000 198 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 MTND5P5-201ENST00000503764 376 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 AC026782.1-201ENST00000512952 449 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 MIR2355-201ENST00000517199 87 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 AC091925.1-201ENST00000623204 462 ntBASIC0.25□□□□□ -2.37
UPK1AO00322 Y_RNA.148-201ENST00000363557 117 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 RNY4P14-201ENST00000363656 96 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 SNORD14E-201ENST00000364009 85 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 Y_RNA.301-201ENST00000364990 103 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 SNORD50B-201ENST00000364995 70 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 SNORD38C-201ENST00000384381 69 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 RNU6-613P-201ENST00000410412 108 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 RNU6-1148P-201ENST00000410992 104 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.24□□□□□ -2.37
UPK1AO00322 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 SNORA68.3-201ENST00000515906 83 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 SNORA25.10-201ENST00000515926 124 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 RNU4-49P-201ENST00000516080 140 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 Y_RNA.670-201ENST00000516255 105 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 RNU6-307P-201ENST00000516743 106 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 Y_RNA.708-201ENST00000516950 96 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.24□□□□□ -2.37
UPK1AO00322 AC005899.2-201ENST00000584353 90 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 AC103591.3-201ENST00000608684 209 ntBASIC0.24□□□□□ -2.37
UPK1AO00322 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.24□□□□□ -2.37
UPK1AO00322 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
UPK1AO00322 Y_RNA.89-201ENST00000363031 102 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 Y_RNA.295-201ENST00000364918 102 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 RNU6-396P-201ENST00000365369 105 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 Y_RNA.368-201ENST00000365547 113 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 MIR802-201ENST00000390235 94 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 RNU6-177P-201ENST00000411257 104 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 RNU6-329P-201ENST00000459618 107 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.23□□□□□ -2.37
UPK1AO00322 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 AC005972.2-201ENST00000604690 348 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 PISRT1.1-201ENST00000616930 107 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 AC007742.2-201ENST00000618226 398 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 AC092794.2-201ENST00000620933 563 ntBASIC0.23□□□□□ -2.37
UPK1AO00322 AL589743.1-201ENST00000551932 2712 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 AC090625.1-201ENST00000357130 210 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 Y_RNA.168-201ENST00000363740 102 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 SNORA72-201ENST00000384339 132 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 RNU6-342P-201ENST00000384521 104 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 RNU6-601P-201ENST00000384540 107 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 MIR1302-7-201ENST00000408841 72 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.22□□□□□ -2.37
UPK1AO00322 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.22□□□□□ -2.37
UPK1AO00322 RPS3AP52-201ENST00000435639 297 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.22□□□□□ -2.37
UPK1AO00322 CHEK2P4-201ENST00000450340 246 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 MIR2053-201ENST00000459295 91 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.22□□□□□ -2.37
UPK1AO00322 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.22□□□□□ -2.37
UPK1AO00322 AC024909.2-201ENST00000553035 286 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 MIR548AR-201ENST00000582191 57 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 MIR1244-1-201ENST00000612829 85 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 MIR1244-3-201ENST00000635744 85 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 MIR1244-2-201ENST00000636449 85 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 MIR1244-4-202ENST00000636813 85 ntBASIC0.22□□□□□ -2.37
UPK1AO00322 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.22□□□□□ -2.37
UPK1AO00322 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.21□□□□□ -2.38
UPK1AO00322 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.21□□□□□ -2.38
UPK1AO00322 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 Y_RNA.41-201ENST00000362646 102 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 RNU6-961P-201ENST00000363893 105 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 Y_RNA.376-201ENST00000365638 108 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 RNU6-926P-201ENST00000384075 107 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 MIR520F-201ENST00000384824 87 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 MIR573-201ENST00000384964 99 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 MIR520H-201ENST00000385126 88 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 RNU2-54P-201ENST00000410299 190 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 RPL7P42-201ENST00000481005 679 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 RPL17P19-201ENST00000489069 552 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 RNU6-977P-201ENST00000516411 103 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 AL355375.2-201ENST00000574825 175 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 AL162730.1-201ENST00000605734 292 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 AC015726.2-201ENST00000620112 122 ntBASIC0.21□□□□□ -2.38
UPK1AO00322 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
UPK1AO00322 Y_RNA.194-201ENST00000363985 102 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 RNU4-45P-201ENST00000365469 141 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 SNORD116-2-201ENST00000384274 95 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 SNORD116-6-201ENST00000384711 96 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 SNORD28B-201ENST00000390993 75 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 MIR548F5-201ENST00000408421 86 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 RNU2-61P-201ENST00000411069 191 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 FCF1P4-201ENST00000448326 183 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 AC107399.1-201ENST00000451226 265 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 RNU6-155P-201ENST00000516347 100 ntBASIC0.2□□□□□ -2.38
UPK1AO00322 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms