Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC022616.4-201ENST00000522985 181 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 AL121655.1-201ENST00000605811 308 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 AC011373.1-201ENST00000607270 237 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 AC004832.4-201ENST00000608952 331 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 AL591926.4-201ENST00000616895 298 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 RNU4-79P-201ENST00000362764 141 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 RNU6-833P-201ENST00000363486 107 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 Y_RNA.315-201ENST00000365117 102 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 Y_RNA.439-201ENST00000384119 94 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 Y_RNA.526-201ENST00000384572 110 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 AC024067.1-201ENST00000426199 223 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 RPL39P39-201ENST00000455840 151 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 U8.20-201ENST00000459445 131 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 AC114811.1-201ENST00000507207 168 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 RNU6-1170P-201ENST00000515974 106 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 SNORA70.22-201ENST00000517160 124 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.02□□□□□ -2.25
PDLIM1O00151 FAM106DP-201ENST00000586416 501 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 AL357312.1-201ENST00000603879 298 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 SNORD58B-201ENST00000607313 66 ntBASIC1.02□□□□□ -2.25
PDLIM1O00151 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.02□□□□□ -2.25
PDLIM1O00151 RNU6-1084P-201ENST00000362498 107 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 Y_RNA.341-201ENST00000365341 102 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 Y_RNA.462-201ENST00000384268 102 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 SNORD41-201ENST00000386967 70 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 RPS20P10-201ENST00000451209 253 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 AC093852.1-201ENST00000503587 266 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 SNORA31.2-201ENST00000516019 134 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 AP001094.1-201ENST00000579805 193 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 BX284668.6-201ENST00000606899 438 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 AC027279.3-201ENST00000625055 122 ntBASIC1.01□□□□□ -2.25
PDLIM1O00151 Y_RNA.4-201ENST00000362333 112 ntBASIC1□□□□□ -2.25
PDLIM1O00151 Y_RNA.143-201ENST00000363520 106 ntBASIC1□□□□□ -2.25
PDLIM1O00151 Y_RNA.471-201ENST00000384312 102 ntBASIC1□□□□□ -2.25
PDLIM1O00151 RNY1P14-201ENST00000384426 108 ntBASIC1□□□□□ -2.25
PDLIM1O00151 AC022028.1-201ENST00000412054 408 ntBASIC1□□□□□ -2.25
PDLIM1O00151 LINC01399-202ENST00000458450 244 ntBASIC1□□□□□ -2.25
PDLIM1O00151 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
PDLIM1O00151 SNORA25.10-201ENST00000515926 124 ntBASIC1□□□□□ -2.25
PDLIM1O00151 SNORA31.4-201ENST00000516049 129 ntBASIC1□□□□□ -2.25
PDLIM1O00151 Y_RNA.713-201ENST00000517013 96 ntBASIC1□□□□□ -2.25
PDLIM1O00151 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
PDLIM1O00151 AL022345.2-201ENST00000606307 135 ntBASIC1□□□□□ -2.25
PDLIM1O00151 AL133255.1-201ENST00000606374 441 ntBASIC1□□□□□ -2.25
PDLIM1O00151 RNU4-50P-201ENST00000364361 141 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 SNORD14.1-201ENST00000365609 90 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 Y_RNA.424-201ENST00000384063 103 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 RNU6-937P-201ENST00000384325 106 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 SNORA72-201ENST00000384339 132 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 RNU6-21P-201ENST00000384710 107 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 RNU6-910P-201ENST00000390844 107 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 MTND4LP11-201ENST00000422184 280 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.99□□□□□ -2.25
PDLIM1O00151 MTATP6P23-201ENST00000440153 476 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 U8.19-201ENST00000459095 133 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 AC048334.1-201ENST00000477975 159 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 MIR4423-201ENST00000580922 80 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 MIR4781-201ENST00000585250 76 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 DEFB117-201ENST00000602356 141 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 AL080274.1-201ENST00000605565 220 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 AC012676.2-201ENST00000619258 186 ntBASIC0.99□□□□□ -2.25
PDLIM1O00151 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
PDLIM1O00151 Y_RNA.253-201ENST00000364562 112 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 Y_RNA.431-201ENST00000384086 102 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 MIR526A1-201ENST00000384897 85 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 MIR452-201ENST00000385020 85 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
PDLIM1O00151 RNU4-30P-201ENST00000410245 143 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
PDLIM1O00151 Y_RNA.714-201ENST00000517065 90 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 AC040926.1-201ENST00000530195 238 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 AC136932.1-201ENST00000574771 208 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 AC007485.1-201ENST00000616755 206 ntBASIC0.98□□□□□ -2.25
PDLIM1O00151 MIR369-201ENST00000362155 70 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 U8.5-201ENST00000364528 136 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 Y_RNA.419-201ENST00000384041 102 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 Y_RNA.551-201ENST00000384661 102 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 MIR1298-201ENST00000408783 112 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 RNU6-1054P-201ENST00000411293 104 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.97□□□□□ -2.25
PDLIM1O00151 AC245047.7-201ENST00000440265 293 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 HMGN1P7-201ENST00000491722 313 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 MIR4762-201ENST00000585261 75 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 POLR3GP1-201ENST00000594073 261 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 LARP7P1-201ENST00000605576 316 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.97□□□□□ -2.25
PDLIM1O00151 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.97□□□□□ -2.25
PDLIM1O00151 uc_338.22-201ENST00000622722 187 ntBASIC0.97□□□□□ -2.25
PDLIM1O00151 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.97□□□□□ -2.25
PDLIM1O00151 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.97□□□□□ -2.25
PDLIM1O00151 SNORD81.1-201ENST00000363064 77 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 snoU2-30.1-201ENST00000365012 70 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 Y_RNA.456-201ENST00000384232 111 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 SNORD63-201ENST00000384262 68 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 MIR522-201ENST00000385071 87 ntBASIC0.96□□□□□ -2.26
PDLIM1O00151 RNU6-131P-201ENST00000391144 107 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms