Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SNORA74.3-201ENST00000517108 154 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 AC106800.4-201ENST00000614905 153 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 AC087588.2-201ENST00000617667 426 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 AC098679.4-201ENST00000624241 654 ntBASIC0.83□□□□□ -2.28
DDX39AO00148 SNORD14.1-201ENST00000365609 90 ntBASIC0.82□□□□□ -2.28
DDX39AO00148 MIR520C-201ENST00000385005 87 ntBASIC0.82□□□□□ -2.28
DDX39AO00148 Y_RNA.646-201ENST00000410980 101 ntBASIC0.82□□□□□ -2.28
DDX39AO00148 RNU6-370P-201ENST00000411008 104 ntBASIC0.82□□□□□ -2.28
DDX39AO00148 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
DDX39AO00148 RNU7-4P-201ENST00000516961 62 ntBASIC0.82□□□□□ -2.28
DDX39AO00148 AC055872.1-201ENST00000570978 278 ntBASIC0.82□□□□□ -2.28
DDX39AO00148 MIR5000-201ENST00000577717 103 ntBASIC0.82□□□□□ -2.28
DDX39AO00148 AC240442.1-201ENST00000616055 283 ntBASIC0.82□□□□□ -2.28
DDX39AO00148 RNU6-324P-201ENST00000363957 106 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 Y_RNA.253-201ENST00000364562 112 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 Y_RNA.354-201ENST00000365448 111 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 RNU6-310P-201ENST00000384655 107 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 SNORA75.6-201ENST00000391318 127 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 RNU6-1156P-201ENST00000410365 100 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 CHEK2P4-201ENST00000450340 246 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 U8.19-201ENST00000459095 133 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 AC144568.1-201ENST00000520139 137 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
DDX39AO00148 AC005176.2-201ENST00000596933 147 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 U6atac.1-201ENST00000616025 117 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 SEPT14P17-201ENST00000617978 177 ntBASIC0.81□□□□□ -2.28
DDX39AO00148 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
DDX39AO00148 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
DDX39AO00148 RNU6-1084P-201ENST00000362498 107 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 Y_RNA.101-201ENST00000363154 102 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 RNU6-1188P-201ENST00000363795 107 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 RNA5SP48-201ENST00000363969 126 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 Y_RNA.248-201ENST00000364501 109 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 SNORD81.2-201ENST00000365153 76 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 AC117470.1-201ENST00000381974 330 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 MIR605-201ENST00000385078 83 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 MT-TL1-201ENST00000386347 75 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 SNORD78.2-201ENST00000391076 69 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 RNU6-876P-201ENST00000391295 104 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 RNU2-61P-201ENST00000411069 191 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 MLLT10P1-201ENST00000418346 262 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 HMGN2P32-201ENST00000444648 269 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 AC092794.1-201ENST00000612734 582 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 TPTEP1-208ENST00000636884 213 ntBASIC0.8□□□□□ -2.28
DDX39AO00148 SNORA25.3-201ENST00000363205 127 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 RNY3P4-201ENST00000384428 101 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 MIR522-201ENST00000385071 87 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.79□□□□□ -2.28
DDX39AO00148 PRDX4P1-201ENST00000507189 574 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 RNU6-155P-201ENST00000516347 100 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 RNU7-43P-201ENST00000516554 64 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 SNORD45.4-201ENST00000516629 73 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 AC004812.1-201ENST00000540773 146 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 AL353765.1-201ENST00000605514 183 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 AC104465.1-201ENST00000611365 139 ntBASIC0.79□□□□□ -2.28
DDX39AO00148 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
DDX39AO00148 snoU2-30.1-201ENST00000365012 70 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 RNU6-890P-201ENST00000384121 107 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 RNU6-1297P-201ENST00000384415 104 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 MTND1P2-201ENST00000430604 821 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 RNU7-41P-201ENST00000515917 61 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 SNORA18.7-201ENST00000516910 131 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 Y_RNA.714-201ENST00000517065 90 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 MIR4764-201ENST00000580680 88 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 MIR5690-201ENST00000583739 73 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 AC022306.2-201ENST00000617563 647 ntBASIC0.78□□□□□ -2.28
DDX39AO00148 RNY3P11-201ENST00000364153 102 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 RNU6-131P-201ENST00000391144 107 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 Y_RNA.619-201ENST00000410951 90 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 RNU6-1304P-201ENST00000411374 106 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 RPS26P5-201ENST00000418544 335 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.77□□□□□ -2.29
DDX39AO00148 RNU6-1132P-201ENST00000459214 107 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 SNORA25.10-201ENST00000515926 124 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 RNU6-470P-201ENST00000515954 104 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 AP003716.2-201ENST00000528260 108 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 AC109810.1-201ENST00000534066 224 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 AC131055.1-201ENST00000584626 316 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 AC005972.2-201ENST00000604690 348 ntBASIC0.77□□□□□ -2.29
DDX39AO00148 RNY1-201ENST00000364228 113 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 RNU6-20P-201ENST00000384106 107 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 Y_RNA.446-201ENST00000384178 104 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 Y_RNA.474-201ENST00000384341 102 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 MIR1185-1-201ENST00000408598 86 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 Y_RNA.605-201ENST00000410577 105 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 AL035398.1-201ENST00000430869 322 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 RPL30P15-201ENST00000457129 321 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 RNU7-169P-201ENST00000459456 61 ntBASIC0.76□□□□□ -2.29
DDX39AO00148 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms