Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RPS20P10-201ENST00000451209 253 ntBASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 AC233266.1-201ENST00000454518 96 ntBASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 AL049830.1-201ENST00000468034 425 ntBASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 AC242852.1-201ENST00000612151 96 ntBASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 AL078604.3-201ENST00000615580 211 ntBASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 AC244015.1-201ENST00000622301 99 ntBASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 SNORD3E-202ENST00000627253 216 ntBASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
NEDD8-MDP1E9PL57 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.310-201ENST00000365063 113 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.355-201ENST00000365462 98 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 SNORA22B-201ENST00000383876 138 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-1080P-201ENST00000383982 107 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.424-201ENST00000384063 103 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 RNA5SP482-201ENST00000391269 118 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU4-30P-201ENST00000410245 143 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-1046P-201ENST00000516538 107 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU7-110P-201ENST00000516891 62 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.711-201ENST00000516993 102 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.713-201ENST00000517013 96 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 AC022616.4-201ENST00000522985 181 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 AC020661.2-201ENST00000560114 134 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR4778-201ENST00000577635 80 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR3937-201ENST00000580135 106 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 AC124312.5-201ENST00000604451 268 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 AC011373.1-201ENST00000607270 237 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR7111-201ENST00000619751 72 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 AL121890.5-201ENST00000620848 304 ntBASIC1.21□□□□□ -2.22
NEDD8-MDP1E9PL57 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.286-201ENST00000364813 102 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 SNX2P2-201ENST00000424553 323 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 AL135790.2-201ENST00000437701 267 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 RPL39P38-201ENST00000467018 153 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 AC092991.1-201ENST00000477176 376 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.715-201ENST00000517082 110 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 AL512310.8-201ENST00000550183 120 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 DEFB117-201ENST00000602356 141 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 AC005972.2-201ENST00000604690 348 ntBASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.2□□□□□ -2.22
NEDD8-MDP1E9PL57 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.216-201ENST00000364205 93 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.796-201ENST00000364268 102 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-450P-201ENST00000364654 107 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.799-201ENST00000364992 102 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.368-201ENST00000365547 113 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR653-201ENST00000385279 96 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR548P-201ENST00000408336 84 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 MTCO2P12-201ENST00000427426 682 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 AC093850.1-201ENST00000454121 251 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 snoU13.18-201ENST00000459483 104 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 HMGN1P10-201ENST00000474557 553 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-1116P-201ENST00000517269 99 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-988P-201ENST00000519081 107 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 AC090821.2-201ENST00000523552 176 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 AC011604.1-201ENST00000545978 196 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR3664-201ENST00000579074 99 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 RAC1P9-201ENST00000604990 392 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 AC106754.2-201ENST00000623006 233 ntBASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NEDD8-MDP1E9PL57 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.222-201ENST00000364264 102 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU4-76P-201ENST00000364509 141 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 SNORA63.7-201ENST00000365579 123 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 AL590004.1-201ENST00000405321 300 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR1252-201ENST00000408861 65 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-710P-201ENST00000410424 105 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 MTCYBP6-201ENST00000441810 138 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR3145-201ENST00000580727 82 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR4452-201ENST00000583004 71 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR3171-201ENST00000584270 74 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 AL078603.1-201ENST00000603824 313 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 AP001485.1-201ENST00000604799 199 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 AL591926.4-201ENST00000616895 298 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
NEDD8-MDP1E9PL57 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 MIR96-201ENST00000362288 78 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.105-201ENST00000363182 111 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.183-201ENST00000363882 113 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 Y_RNA.341-201ENST00000365341 102 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-1323P-201ENST00000384025 107 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-1065P-201ENST00000384513 106 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 SNORD115-46-201ENST00000390982 71 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU6-855P-201ENST00000410395 104 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 SEPT14P8-201ENST00000508026 178 ntBASIC1.17□□□□□ -2.22
NEDD8-MDP1E9PL57 RNU7-12P-201ENST00000516030 62 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms