Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.18□□□□□ -2.6
COL6A5A8TX70 SNORD115-25-201ENST00000362619 82 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 SNORD74.6-201ENST00000364796 70 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 SNORA26.4-201ENST00000391188 123 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 MIR4423-201ENST00000580922 80 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 RNU6-354P-201ENST00000383862 107 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 RNU6-610P-201ENST00000384264 107 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 RNU6-125P-201ENST00000384505 107 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 snoU13.8-201ENST00000458890 104 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-1.18□□□□□ -2.6
COL6A5A8TX70 AC124016.2-201ENST00000610058 665 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 AL139418.1-201ENST00000613613 177 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 uc_338.10-201ENST00000621872 182 ntBASIC-1.18□□□□□ -2.6
COL6A5A8TX70 RNU6-245P-201ENST00000384020 107 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
COL6A5A8TX70 U8.17-201ENST00000391292 132 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.19□□□□□ -2.6
COL6A5A8TX70 SEPT14P24-201ENST00000447236 180 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.19□□□□□ -2.6
COL6A5A8TX70 MTATP6P14-201ENST00000455189 673 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 SEPT14P4-201ENST00000513445 186 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 SNORD115-16-201ENST00000363887 82 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 SNORA40C-201ENST00000391285 128 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 MTATP6P17-201ENST00000431030 672 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 RNU6-168P-201ENST00000516189 101 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 SNORD39.3-201ENST00000584451 71 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AL159153.1-201ENST00000619688 317 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AL163152.1-201ENST00000642001 374 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 SNORD115-34-201ENST00000362441 82 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 SNORD115-21-201ENST00000362963 81 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 MIR526A1-201ENST00000384897 85 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.19□□□□□ -2.6
COL6A5A8TX70 MIR548H3-201ENST00000408771 118 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AC245047.3-201ENST00000429428 127 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.19□□□□□ -2.6
COL6A5A8TX70 SNRPGP10-201ENST00000432323 225 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AC090616.4-201ENST00000448026 115 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AC097484.2-201ENST00000509147 251 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 AC090517.1-201ENST00000569307 266 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.19□□□□□ -2.6
COL6A5A8TX70 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 SNORD45.3-201ENST00000363836 72 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 SNORA27.3-201ENST00000364937 134 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 RNU6-596P-201ENST00000365395 98 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 MT-TN-201ENST00000387400 73 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 AL606517.1-201ENST00000446914 387 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.2□□□□□ -2.6
COL6A5A8TX70 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.2□□□□□ -2.6
COL6A5A8TX70 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.2□□□□□ -2.6
COL6A5A8TX70 POLR3GP1-201ENST00000594073 261 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 AP000753.3-201ENST00000604083 169 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 MTND4P21-201ENST00000453886 1357 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 SNORD65.1-201ENST00000390889 71 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 AF186996.7-201ENST00000492781 209 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.2□□□□□ -2.6
COL6A5A8TX70 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.2□□□□□ -2.6
COL6A5A8TX70 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 RNU6-512P-201ENST00000364438 103 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 MIR1257-201ENST00000408490 117 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 MTND2P22-201ENST00000444325 1033 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 MTND1P27-201ENST00000451117 902 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 AC025459.1-201ENST00000504072 156 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-1.21□□□□□ -2.6
COL6A5A8TX70 AL158211.4-201ENST00000606988 584 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 MIR181A1-201ENST00000385026 110 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 MIR891A-201ENST00000401237 79 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 RNU7-188P-201ENST00000517063 64 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 AC108747.1-201ENST00000609508 535 ntBASIC-1.21□□□□□ -2.6
COL6A5A8TX70 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.21□□□□□ -2.6
COL6A5A8TX70 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.22□□□□□ -2.6
COL6A5A8TX70 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.22□□□□□ -2.6
COL6A5A8TX70 RNU6-641P-201ENST00000384006 107 ntBASIC-1.22□□□□□ -2.6
COL6A5A8TX70 PSMA6P3-201ENST00000428242 164 ntBASIC-1.22□□□□□ -2.6
COL6A5A8TX70 TIMM9P3-201ENST00000428659 274 ntBASIC-1.22□□□□□ -2.6
COL6A5A8TX70 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.22□□□□□ -2.6
COL6A5A8TX70 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.22□□□□□ -2.6
COL6A5A8TX70 MIR4308-201ENST00000580634 81 ntBASIC-1.22□□□□□ -2.6
COL6A5A8TX70 MIR4264-201ENST00000583520 66 ntBASIC-1.22□□□□□ -2.6
COL6A5A8TX70 MIR548A2-201ENST00000384956 97 ntBASIC-1.22□□□□□ -2.61
COL6A5A8TX70 MRPL42P3-201ENST00000401492 326 ntBASIC-1.22□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms