Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNU6-117P-201ENST00000365415 107 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.364-201ENST00000365532 101 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 RNU6-700P-201ENST00000391043 107 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 MTND3P8-201ENST00000412909 339 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 AC016907.1-201ENST00000419483 435 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 PIGPP3-201ENST00000425307 415 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 RNU6-625P-201ENST00000459412 107 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 RNU6-277P-201ENST00000516272 106 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 RNU6-758P-201ENST00000516292 89 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 MIR4790-201ENST00000577799 79 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 MIR4764-201ENST00000580680 88 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 CASC19-280ENST00000642102 1351 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 SNORA9.1-201ENST00000362412 131 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.279-201ENST00000364763 95 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.368-201ENST00000365547 113 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 RNU6-439P-201ENST00000384188 106 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 SNORA72-201ENST00000384339 132 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 RNU6-125P-201ENST00000384505 107 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.571-201ENST00000384753 98 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 MIR520C-201ENST00000385005 87 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 MTND1P34-201ENST00000438556 671 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 AC093019.1-201ENST00000443135 252 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.708-201ENST00000516950 96 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 RNU1-117P-201ENST00000517041 158 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 EIF1P4-201ENST00000572664 335 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 AL021879.1-201ENST00000611756 288 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 AC010999.1-201ENST00000611856 324 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 AC093783.1-201ENST00000612976 329 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 AC240442.1-201ENST00000616055 283 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 AL591926.4-201ENST00000616895 298 ntBASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
COL6A6A6NMZ7 RNU6-1059P-201ENST00000363752 98 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 SNORA20B-201ENST00000384220 132 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 RNA5SP109-201ENST00000391010 116 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.594-201ENST00000410373 140 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 RNU7-87P-201ENST00000459343 62 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 MIR4661-201ENST00000582720 75 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 AL391903.3-201ENST00000612158 163 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 MIR3674-201ENST00000636576 68 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 MIR3688-2-201ENST00000636963 87 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 MIR103A2-201ENST00000362154 78 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 RNA5SP368-201ENST00000364298 116 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 RNU5A-5P-201ENST00000411054 116 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 MTND3P10-201ENST00000450967 341 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 AC245047.8-201ENST00000456455 284 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.653-201ENST00000459091 95 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 RNU6-307P-201ENST00000516743 106 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 RNU6-341P-201ENST00000516973 96 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 AC073349.3-201ENST00000617616 186 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 AC106754.2-201ENST00000623006 233 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 U6.115-201ENST00000636045 103 ntBASIC0.35□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.185-201ENST00000363894 100 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 snoU2-30.1-201ENST00000365012 70 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 RNU6-767P-201ENST00000384132 107 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 RNY3P4-201ENST00000384428 101 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 MIR518A1-201ENST00000385068 85 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.646-201ENST00000410980 101 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 AC107399.1-201ENST00000451226 265 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 RNU7-141P-201ENST00000459304 62 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 U8.20-201ENST00000459445 131 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 AC099513.1-201ENST00000490423 301 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 Y_RNA.714-201ENST00000517065 90 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 MIR5690-201ENST00000583739 73 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 AC018638.8-201ENST00000588755 281 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 AC040896.1-201ENST00000613819 479 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 PISRT1.1-201ENST00000616930 107 ntBASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.34□□□□□ -2.35
COL6A6A6NMZ7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.6-201ENST00000362350 114 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 RNU4-40P-201ENST00000364351 143 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 RNU6-424P-201ENST00000384367 105 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 Y_RNA.496-201ENST00000384444 101 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 SNORA2B-201ENST00000384583 137 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 RNU6-331P-201ENST00000384724 107 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 MIR628-201ENST00000385229 95 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 SNORD78.2-201ENST00000391076 69 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 U8.16-201ENST00000391279 133 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 RNU6-1148P-201ENST00000410992 104 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 AL606490.4-201ENST00000423117 127 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 AL137792.2-201ENST00000443484 235 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 COX6CP6-201ENST00000490840 228 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 RNU7-12P-201ENST00000516030 62 ntBASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.34□□□□□ -2.36
COL6A6A6NMZ7 AC023442.1-201ENST00000531247 422 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms