Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AL049777.1-201ENST00000622740 518 ntBASIC-2.43□□□□□ -2.8
LINC01549A6NIU2 SNORD24-201ENST00000383884 75 ntBASIC-2.44□□□□□ -2.8
LINC01549A6NIU2 MIR487A-201ENST00000385009 80 ntBASIC-2.44□□□□□ -2.8
LINC01549A6NIU2 RNU6-830P-201ENST00000516353 107 ntBASIC-2.44□□□□□ -2.8
LINC01549A6NIU2 RNU6-777P-201ENST00000364265 104 ntBASIC-2.45□□□□□ -2.8
LINC01549A6NIU2 Y_RNA.368-201ENST00000365547 113 ntBASIC-2.45□□□□□ -2.8
LINC01549A6NIU2 MIR522-201ENST00000385071 87 ntBASIC-2.45□□□□□ -2.8
LINC01549A6NIU2 RNU7-55P-201ENST00000459426 62 ntBASIC-2.45□□□□□ -2.8
LINC01549A6NIU2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-2.45□□□□□ -2.8
LINC01549A6NIU2 MTND3P13-201ENST00000574391 343 ntBASIC-2.45□□□□□ -2.8
LINC01549A6NIU2 AC100814.1-201ENST00000606963 623 ntBASIC-2.45□□□□□ -2.8
LINC01549A6NIU2 AL391834.2-201ENST00000609982 546 ntBASIC-2.45□□□□□ -2.8
LINC01549A6NIU2 RNU5B-1-201ENST00000363286 116 ntBASIC-2.46□□□□□ -2.8
LINC01549A6NIU2 Y_RNA.151-201ENST00000363566 112 ntBASIC-2.46□□□□□ -2.8
LINC01549A6NIU2 RNY3P13-201ENST00000365542 102 ntBASIC-2.46□□□□□ -2.8
LINC01549A6NIU2 MIR539-201ENST00000365690 78 ntBASIC-2.46□□□□□ -2.8
LINC01549A6NIU2 SNORD38C-201ENST00000384381 69 ntBASIC-2.46□□□□□ -2.8
LINC01549A6NIU2 RNU6-329P-201ENST00000459618 107 ntBASIC-2.46□□□□□ -2.8
LINC01549A6NIU2 RNY4P37-201ENST00000516225 96 ntBASIC-2.46□□□□□ -2.8
LINC01549A6NIU2 AC139792.3-201ENST00000623525 224 ntBASIC-2.46□□□□□ -2.8
LINC01549A6NIU2 MTND5P17-201ENST00000418405 1603 ntBASIC-2.46□□□□□ -2.8
LINC01549A6NIU2 RNU6-865P-201ENST00000364772 107 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 SNORA1.2-201ENST00000365189 134 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 AL158050.1-201ENST00000416077 457 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 SEPT14P24-201ENST00000447236 180 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 snoU13.13-201ENST00000458842 104 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 RNU2-10P-201ENST00000516375 211 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 RNU7-161P-201ENST00000517289 62 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 MIR5591-201ENST00000578248 65 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 MIR4770-201ENST00000579149 58 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 AL512506.1-201ENST00000613918 449 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 uc_338.10-201ENST00000621872 182 ntBASIC-2.47□□□□□ -2.8
LINC01549A6NIU2 Y_RNA.18-201ENST00000362461 102 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 Y_RNA.38-201ENST00000362617 102 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 RNU6-1036P-201ENST00000383959 104 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 Y_RNA.453-201ENST00000384223 109 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 Y_RNA.588-201ENST00000391254 102 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 AC018865.2-201ENST00000423631 129 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 AC114878.1-201ENST00000441166 358 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 RNA5SP20-201ENST00000515976 84 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 RNU6-479P-201ENST00000516348 105 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 AP000676.1-201ENST00000533307 52 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 AC107905.1-201ENST00000616204 426 ntBASIC-2.48□□□□□ -2.81
LINC01549A6NIU2 RNA5SP245-201ENST00000364239 121 ntBASIC-2.49□□□□□ -2.81
LINC01549A6NIU2 SNORD87-201ENST00000364849 89 ntBASIC-2.49□□□□□ -2.81
LINC01549A6NIU2 MIRLET7F2-201ENST00000385277 83 ntBASIC-2.49□□□□□ -2.81
LINC01549A6NIU2 RNA5SP266-201ENST00000410273 108 ntBASIC-2.49□□□□□ -2.81
LINC01549A6NIU2 AC074085.1-201ENST00000413598 418 ntBASIC-2.49□□□□□ -2.81
LINC01549A6NIU2 RNU7-104P-201ENST00000459398 79 ntBASIC-2.49□□□□□ -2.81
LINC01549A6NIU2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-2.49□□□□□ -2.81
LINC01549A6NIU2 SNORA24-201ENST00000384096 131 ntBASIC-2.5□□□□□ -2.81
LINC01549A6NIU2 AL603914.1-201ENST00000401964 204 ntBASIC-2.5□□□□□ -2.81
LINC01549A6NIU2 RNU2-8P-201ENST00000410727 190 ntBASIC-2.5□□□□□ -2.81
LINC01549A6NIU2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-2.5□□□□□ -2.81
LINC01549A6NIU2 MTND4P3-201ENST00000417829 541 ntBASIC-2.5□□□□□ -2.81
LINC01549A6NIU2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-2.5□□□□□ -2.81
LINC01549A6NIU2 AL356055.1-201ENST00000602528 446 ntBASIC-2.5□□□□□ -2.81
LINC01549A6NIU2 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.51□□□□□ -2.81
LINC01549A6NIU2 Y_RNA.329-201ENST00000365209 107 ntBASIC-2.51□□□□□ -2.81
LINC01549A6NIU2 SNORA20B-201ENST00000384220 132 ntBASIC-2.51□□□□□ -2.81
LINC01549A6NIU2 RNA5SP494-201ENST00000410653 129 ntBASIC-2.51□□□□□ -2.81
LINC01549A6NIU2 AC236972.2-201ENST00000434979 310 ntBASIC-2.51□□□□□ -2.81
LINC01549A6NIU2 RNU6-1225P-201ENST00000516336 65 ntBASIC-2.51□□□□□ -2.81
LINC01549A6NIU2 MTND1P5-201ENST00000517906 940 ntBASIC-2.51□□□□□ -2.81
LINC01549A6NIU2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.52□□□□□ -2.81
LINC01549A6NIU2 SNORD50B-201ENST00000364995 70 ntBASIC-2.52□□□□□ -2.81
LINC01549A6NIU2 RNU6-117P-201ENST00000365415 107 ntBASIC-2.52□□□□□ -2.81
LINC01549A6NIU2 Y_RNA.572-201ENST00000384757 98 ntBASIC-2.52□□□□□ -2.81
LINC01549A6NIU2 AL137792.2-201ENST00000443484 235 ntBASIC-2.52□□□□□ -2.81
LINC01549A6NIU2 RPL39P25-201ENST00000449384 154 ntBASIC-2.52□□□□□ -2.81
LINC01549A6NIU2 Y_RNA.637-201ENST00000459424 114 ntBASIC-2.52□□□□□ -2.81
LINC01549A6NIU2 MTCO2P6-201ENST00000463134 685 ntBASIC-2.52□□□□□ -2.81
LINC01549A6NIU2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-2.52□□□□□ -2.81
LINC01549A6NIU2 RNU6-324P-201ENST00000363957 106 ntBASIC-2.53□□□□□ -2.81
LINC01549A6NIU2 MIR1285-2-201ENST00000408311 88 ntBASIC-2.53□□□□□ -2.81
LINC01549A6NIU2 MTND4P18-201ENST00000447010 465 ntBASIC-2.53□□□□□ -2.81
LINC01549A6NIU2 SERF1AP1-201ENST00000514575 187 ntBASIC-2.53□□□□□ -2.81
LINC01549A6NIU2 RNA5SP476-201ENST00000516613 103 ntBASIC-2.53□□□□□ -2.81
LINC01549A6NIU2 RNU7-181P-201ENST00000517234 74 ntBASIC-2.53□□□□□ -2.81
LINC01549A6NIU2 POLR3GP2-201ENST00000588366 668 ntBASIC-2.53□□□□□ -2.81
LINC01549A6NIU2 AC068137.4-201ENST00000638485 296 ntBASIC-2.53□□□□□ -2.81
LINC01549A6NIU2 RNU6-407P-201ENST00000365280 104 ntBASIC-2.54□□□□□ -2.82
LINC01549A6NIU2 RNU6-354P-201ENST00000383862 107 ntBASIC-2.54□□□□□ -2.82
LINC01549A6NIU2 RNU6-610P-201ENST00000384264 107 ntBASIC-2.54□□□□□ -2.82
LINC01549A6NIU2 RNU5E-9P-201ENST00000411164 104 ntBASIC-2.54□□□□□ -2.82
LINC01549A6NIU2 MIR4473-201ENST00000583731 91 ntBASIC-2.54□□□□□ -2.82
LINC01549A6NIU2 Y_RNA.621-201ENST00000411065 96 ntBASIC-2.55□□□□□ -2.82
LINC01549A6NIU2 MTCO2P27-201ENST00000420740 428 ntBASIC-2.55□□□□□ -2.82
LINC01549A6NIU2 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-2.55□□□□□ -2.82
LINC01549A6NIU2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-2.55□□□□□ -2.82
LINC01549A6NIU2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-2.55□□□□□ -2.82
LINC01549A6NIU2 MIR4491-201ENST00000581087 68 ntBASIC-2.55□□□□□ -2.82
LINC01549A6NIU2 AC137590.2-201ENST00000619709 240 ntBASIC-2.55□□□□□ -2.82
LINC01549A6NIU2 AC127459.3-201ENST00000624328 466 ntBASIC-2.55□□□□□ -2.82
LINC01549A6NIU2 RNA5SP403-201ENST00000363598 108 ntBASIC-2.56□□□□□ -2.82
LINC01549A6NIU2 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.56□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms