Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 RNU7-87P-201ENST00000459343 62 ntBASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 AC005730.3-201ENST00000583067 366 ntBASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 AC005014.2-201ENST00000607795 599 ntBASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
RBFOX3A6NFN3 SNORD50B-201ENST00000364995 70 ntBASIC0.14□□□□□ -2.39
RBFOX3A6NFN3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.14□□□□□ -2.39
RBFOX3A6NFN3 RNU6-329P-201ENST00000459618 107 ntBASIC0.14□□□□□ -2.39
RBFOX3A6NFN3 AC092989.1-201ENST00000481235 277 ntBASIC0.14□□□□□ -2.39
RBFOX3A6NFN3 RNU6-1088P-201ENST00000516850 104 ntBASIC0.14□□□□□ -2.39
RBFOX3A6NFN3 AC090617.10-201ENST00000624308 134 ntBASIC0.14□□□□□ -2.39
RBFOX3A6NFN3 MIR3662-201ENST00000637030 95 ntBASIC0.14□□□□□ -2.39
RBFOX3A6NFN3 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 RNU6-580P-201ENST00000365159 107 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 RNU6-396P-201ENST00000365369 105 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 MIR520H-201ENST00000385126 88 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 MT-TN-201ENST00000387400 73 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 RNU6-131P-201ENST00000391144 107 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 MLLT10P1-201ENST00000418346 262 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 RNU6-566P-201ENST00000516790 107 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 MIR548AR-201ENST00000582191 57 ntBASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.13□□□□□ -2.39
RBFOX3A6NFN3 SNORD116-9-201ENST00000384000 95 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 RNU6-1013P-201ENST00000384180 107 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 SNORD116-3-201ENST00000384287 95 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 SNORD116-7-201ENST00000384404 95 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 SNORD116-5-201ENST00000384462 95 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 MIR7-2-201ENST00000384970 110 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 SNORD28B-201ENST00000390993 75 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 RNU6-1314P-201ENST00000517139 104 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 MIR6128-201ENST00000615528 109 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 AC092634.7-201ENST00000621022 103 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 AC024614.3-201ENST00000637860 256 ntBASIC0.12□□□□□ -2.39
RBFOX3A6NFN3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 AL031003.1-201ENST00000404229 172 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 SNORD12B-201ENST00000410433 91 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 RNU2-61P-201ENST00000411069 191 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 AL358176.2-201ENST00000425769 204 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 MTND1P1-201ENST00000445453 368 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 RNU6-273P-201ENST00000516937 96 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 MIR3612-201ENST00000579753 87 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 RBM11P1-201ENST00000604951 799 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 AC018462.2-201ENST00000605375 395 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 MIR8087-201ENST00000612745 78 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 MIR6779-201ENST00000617283 64 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 AP000770.2-201ENST00000623694 100 ntBASIC0.11□□□□□ -2.39
RBFOX3A6NFN3 MIR103A1-201ENST00000362165 78 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 RNU6-1301P-201ENST00000362724 104 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 RNU6-716P-201ENST00000365621 103 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 SNORA72-201ENST00000384339 132 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 RNU6-831P-201ENST00000384548 107 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 MIR520F-201ENST00000384824 87 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 AL139396.1-201ENST00000421137 167 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 SNRPGP10-201ENST00000432323 225 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 MTND2P22-201ENST00000444325 1033 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 RNU6-830P-201ENST00000516353 107 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 AC012433.1-201ENST00000588916 398 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 AL162730.1-201ENST00000605734 292 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 AC004467.1-201ENST00000615678 330 ntBASIC0.1□□□□□ -2.39
RBFOX3A6NFN3 MIR330-201ENST00000362196 94 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 SNORD44.1-201ENST00000363202 61 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 RNU4-67P-201ENST00000364569 141 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 SNORD38C-201ENST00000384381 69 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 RNU2-16P-201ENST00000410712 136 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 AC074085.1-201ENST00000413598 418 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 AC009161.1-201ENST00000417306 376 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 RNU6-977P-201ENST00000516411 103 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 MIR2355-201ENST00000517199 87 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 AC109635.3-201ENST00000529536 185 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 AC022523.2-201ENST00000561045 150 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 AC006380.1-201ENST00000603598 186 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 AC005972.2-201ENST00000604690 348 ntBASIC0.09□□□□□ -2.4
RBFOX3A6NFN3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 SNORD14E-201ENST00000364009 85 ntBASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 MIR518A1-201ENST00000385068 85 ntBASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 RNU2-54P-201ENST00000410299 190 ntBASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 RNU6-1148P-201ENST00000410992 104 ntBASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 SNRPGP12-201ENST00000449481 213 ntBASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 AC026782.1-201ENST00000512952 449 ntBASIC0.08□□□□□ -2.4
RBFOX3A6NFN3 AC087685.1-201ENST00000587507 141 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms