Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
TRIM49BA6NDI0 AC134026.1-201ENST00000623249 2239 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 Y_RNA.230-201ENST00000364348 109 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 Y_RNA.237-201ENST00000364439 102 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 SNORD63-201ENST00000384262 68 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 Y_RNA.461-201ENST00000384263 103 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 RNA5SP511-201ENST00000410487 115 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 RNU6-1203P-201ENST00000410703 110 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 RNU2-61P-201ENST00000411069 191 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 AC010154.1-201ENST00000425857 269 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 MTCYBP9-201ENST00000431021 303 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 MTCO1P5-201ENST00000433573 344 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 AC091021.1-201ENST00000468051 388 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 TRMT112P2-201ENST00000512910 132 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 CYCSP23-201ENST00000519781 313 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 AC090821.2-201ENST00000523552 176 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 AC004832.4-201ENST00000608952 331 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 AL353149.1-201ENST00000610667 244 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 U6.73-201ENST00000619194 103 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 AL121890.5-201ENST00000620848 304 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
TRIM49BA6NDI0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 Y_RNA.117-201ENST00000363294 101 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 Y_RNA.276-201ENST00000364732 109 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 RNU6-662P-201ENST00000384253 104 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 Y_RNA.462-201ENST00000384268 102 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 MIR873-201ENST00000401120 77 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 AC008134.1-201ENST00000420943 193 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 AC079140.2-201ENST00000506193 142 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 AC010598.1-201ENST00000510378 103 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 MTND1P19-201ENST00000511780 315 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 SNORA31.10-201ENST00000516482 106 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 RNU6-1291P-201ENST00000516591 104 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 MIR4503-201ENST00000582187 83 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 MIR8062-201ENST00000621515 85 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 AC127459.3-201ENST00000624328 466 ntBASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.42□□□□□ -2.18
TRIM49BA6NDI0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 RNU6-1266P-201ENST00000362794 105 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 RNU6-290P-201ENST00000365212 101 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 snosnR66.1-201ENST00000391095 99 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 SNORA26.5-201ENST00000391215 123 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 POLR2KP2-201ENST00000438155 177 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 AC074290.1-201ENST00000448883 135 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 MTCO2P24-201ENST00000515611 426 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 RNU6-1338P-201ENST00000516328 91 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 RNU7-172P-201ENST00000517125 64 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 PRR13P7-201ENST00000605538 430 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 AL162730.1-201ENST00000605734 292 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 AC095038.3-201ENST00000634439 195 ntBASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
TRIM49BA6NDI0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
TRIM49BA6NDI0 Y_RNA.226-201ENST00000364337 114 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 SNORA63D-201ENST00000364359 132 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 SNORD1A-201ENST00000364968 72 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 Y_RNA.477-201ENST00000384352 108 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 RNU6-855P-201ENST00000410395 104 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 RNU5A-5P-201ENST00000411054 116 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 AC004965.1-201ENST00000413033 213 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 CST2P1-201ENST00000425770 87 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 AC009474.2-201ENST00000451383 136 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 TRBVB-201ENST00000477100 408 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 RNU6-191P-201ENST00000516295 94 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 Y_RNA.673-201ENST00000516306 88 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 MIR4643-201ENST00000577473 78 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 AC006380.1-201ENST00000603598 186 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 SNORD113-5-201ENST00000607261 78 ntBASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.4□□□□□ -2.19
TRIM49BA6NDI0 RNY1P10-201ENST00000363268 113 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 Y_RNA.193-201ENST00000363979 102 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 RNU6-801P-201ENST00000364087 105 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 RNU6-1310P-201ENST00000384153 107 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 Y_RNA.569-201ENST00000384749 103 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 RNA5SP323-201ENST00000391094 133 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 SNORA40.6-201ENST00000391153 128 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 RPS4XP11-201ENST00000446897 772 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 U8.19-201ENST00000459095 133 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 AC091959.1-201ENST00000495857 238 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 MIR3660-201ENST00000584845 100 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 AC012433.1-201ENST00000588916 398 ntBASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRIM49BA6NDI0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRIM49BA6NDI0 AL391987.6-201ENST00000305671 199 ntBASIC1.38□□□□□ -2.19
TRIM49BA6NDI0 MIR337-201ENST00000362281 93 ntBASIC1.38□□□□□ -2.19
TRIM49BA6NDI0 RNU4-90P-201ENST00000362773 141 ntBASIC1.38□□□□□ -2.19
TRIM49BA6NDI0 RNU4-10P-201ENST00000364383 140 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms