Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC063976.4-201ENST00000421971 163 ntBASIC1.37□□□□□ -2.19
CCDC189A1A4V9 SNRPGP13-201ENST00000442212 177 ntBASIC1.37□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.37□□□□□ -2.19
CCDC189A1A4V9 SNORD79.1-201ENST00000516069 84 ntBASIC1.37□□□□□ -2.19
CCDC189A1A4V9 AC068338.1-201ENST00000565567 176 ntBASIC1.37□□□□□ -2.19
CCDC189A1A4V9 HSPE1P19-201ENST00000603327 295 ntBASIC1.37□□□□□ -2.19
CCDC189A1A4V9 AC104985.2-201ENST00000620598 500 ntBASIC1.37□□□□□ -2.19
CCDC189A1A4V9 RNU6-1084P-201ENST00000362498 107 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 RNU1-17P-201ENST00000363022 152 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.341-201ENST00000365341 102 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.368-201ENST00000365547 113 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.458-201ENST00000384240 102 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 MIR136-201ENST00000385207 82 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 RNU6-131P-201ENST00000391144 107 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.36□□□□□ -2.19
CCDC189A1A4V9 RNU7-110P-201ENST00000516891 62 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 AL133255.1-201ENST00000606374 441 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
CCDC189A1A4V9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.35□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.197-201ENST00000364004 102 ntBASIC1.35□□□□□ -2.19
CCDC189A1A4V9 AC117470.1-201ENST00000381974 330 ntBASIC1.35□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.394-201ENST00000383942 103 ntBASIC1.35□□□□□ -2.19
CCDC189A1A4V9 MIR1298-201ENST00000408783 112 ntBASIC1.35□□□□□ -2.19
CCDC189A1A4V9 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
CCDC189A1A4V9 RNU6-1170P-201ENST00000515974 106 ntBASIC1.35□□□□□ -2.19
CCDC189A1A4V9 AC087685.1-201ENST00000587507 141 ntBASIC1.35□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.61-201ENST00000362835 102 ntBASIC1.34□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.172-201ENST00000363765 102 ntBASIC1.34□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.431-201ENST00000384086 102 ntBASIC1.34□□□□□ -2.19
CCDC189A1A4V9 Y_RNA.551-201ENST00000384661 102 ntBASIC1.34□□□□□ -2.19
CCDC189A1A4V9 RNU6-21P-201ENST00000384710 107 ntBASIC1.34□□□□□ -2.19
CCDC189A1A4V9 RNU6-1248P-201ENST00000391096 64 ntBASIC1.34□□□□□ -2.19
CCDC189A1A4V9 AC108729.3-201ENST00000513484 108 ntBASIC1.34□□□□□ -2.19
CCDC189A1A4V9 SNORD45.4-201ENST00000516629 73 ntBASIC1.34□□□□□ -2.19
CCDC189A1A4V9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC189A1A4V9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.34□□□□□ -2.19
CCDC189A1A4V9 MTND4P29-201ENST00000503122 1372 ntBASIC1.34□□□□□ -2.2
CCDC189A1A4V9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC189A1A4V9 SNORD42.2-201ENST00000365570 69 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 MIR200A-201ENST00000384875 90 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 AC022028.1-201ENST00000412054 408 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 MLLT10P1-201ENST00000418346 262 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 AL591704.2-201ENST00000421658 181 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC189A1A4V9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC189A1A4V9 AC245047.8-201ENST00000456455 284 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 UBL5P1-201ENST00000507979 193 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 SNORA25.10-201ENST00000515926 124 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 RNU6-966P-201ENST00000516479 104 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.33□□□□□ -2.2
CCDC189A1A4V9 AL080274.1-201ENST00000605565 220 ntBASIC1.33□□□□□ -2.2
CCDC189A1A4V9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.80-201ENST00000362996 102 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.112-201ENST00000363250 102 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.310-201ENST00000365063 113 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.485-201ENST00000384395 102 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 SNRPGP10-201ENST00000432323 225 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 OR2A41P-201ENST00000473586 105 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 MIR4661-201ENST00000582720 75 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 POLR3GP1-201ENST00000594073 261 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 AP003357.1-201ENST00000604497 148 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 uc_338.22-201ENST00000622722 187 ntBASIC1.32□□□□□ -2.2
CCDC189A1A4V9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC189A1A4V9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
CCDC189A1A4V9 MIR369-201ENST00000362155 70 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 MIR378A-201ENST00000362177 66 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.31-201ENST00000362574 102 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.395-201ENST00000383945 109 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.535-201ENST00000384612 99 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 MRPL35P3-201ENST00000421557 364 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 AL603825.1-201ENST00000438481 80 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC189A1A4V9 SNORA74.3-201ENST00000517108 154 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 MIR4303-201ENST00000581299 66 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 SNORD58B-201ENST00000607313 66 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 AL512598.1-201ENST00000610158 273 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 AL391903.3-201ENST00000612158 163 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC189A1A4V9 ZNF209P-201ENST00000593450 2304 ntBASIC1.31□□□□□ -2.2
CCDC189A1A4V9 MIR337-201ENST00000362281 93 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.813-201ENST00000364639 102 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 SNORD114-24-201ENST00000365029 72 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 SNORD14.1-201ENST00000365609 90 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 RNU6-474P-201ENST00000384243 107 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.471-201ENST00000384312 102 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 RNY1P14-201ENST00000384426 108 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 AC002429.1-201ENST00000437672 148 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 Y_RNA.639-201ENST00000458981 102 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC189A1A4V9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC189A1A4V9 DEFB117-201ENST00000602356 141 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 AL096861.1-201ENST00000610899 123 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 AC006157.1-201ENST00000611750 366 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 JPX_2.1-201ENST00000614161 69 ntBASIC1.3□□□□□ -2.2
CCDC189A1A4V9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms