Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 AC015540.1-201ENST00000615828 501 ntBASIC0.36□□□□□ -2.35
TRBV11-1A0A0K0K1C0 MIR6516-201ENST00000630554 81 ntBASIC0.36□□□□□ -2.35
TRBV11-1A0A0K0K1C0 MIR4251-201ENST00000635819 61 ntBASIC0.36□□□□□ -2.35
TRBV11-1A0A0K0K1C0 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 Y_RNA.301-201ENST00000364990 103 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 MIR181A1-201ENST00000385026 110 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 RNA5SP118-201ENST00000410385 109 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 RNU6-1050P-201ENST00000410388 107 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 MTCO2P12-201ENST00000427426 682 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 MTND1P4-201ENST00000435196 415 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 MTND5P5-201ENST00000503764 376 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 RNU4-57P-201ENST00000515980 135 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 RNU6-1016P-201ENST00000516689 94 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 RNU2-12P-201ENST00000517216 168 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 AC012433.1-201ENST00000588916 398 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 AC007742.2-201ENST00000618226 398 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
TRBV11-1A0A0K0K1C0 RNU6-1301P-201ENST00000362724 104 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNY4P14-201ENST00000363656 96 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AL031003.1-201ENST00000404229 172 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNA5SP95-201ENST00000410319 137 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MTND2P22-201ENST00000444325 1033 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AL392103.1-201ENST00000447000 198 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 SNORA25.10-201ENST00000515926 124 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU4-49P-201ENST00000516080 140 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.670-201ENST00000516255 105 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RN7SKP12-201ENST00000516275 143 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC011712.1-201ENST00000588959 234 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AL355073.2-201ENST00000612106 557 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC008133.2-201ENST00000624540 351 ntBASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.34□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.41-201ENST00000362646 102 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.89-201ENST00000363031 102 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU6-324P-201ENST00000363957 106 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 SNORD50B-201ENST00000364995 70 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.361-201ENST00000365515 120 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.573-201ENST00000384763 105 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 U8.19-201ENST00000459095 133 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC092989.1-201ENST00000481235 277 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC104695.3-201ENST00000604052 296 ntBASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.33□□□□□ -2.36
TRBV11-1A0A0K0K1C0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.148-201ENST00000363557 117 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.368-201ENST00000365547 113 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNY1P8-201ENST00000383970 114 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 SNRPGP10-201ENST00000432323 225 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC105313.1-201ENST00000509121 353 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.708-201ENST00000516950 96 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR2355-201ENST00000517199 87 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC024909.2-201ENST00000553035 286 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR1244-1-201ENST00000612829 85 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR1244-3-201ENST00000635744 85 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR1244-2-201ENST00000636449 85 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR1244-4-202ENST00000636813 85 ntBASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.32□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU6-593P-201ENST00000364716 112 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.295-201ENST00000364918 102 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR1302-7-201ENST00000408841 72 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RPS3AP52-201ENST00000435639 297 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU6-329P-201ENST00000459618 107 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR2115-201ENST00000516657 100 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNA5SP480-201ENST00000516840 109 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC005972.2-201ENST00000604690 348 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 PISRT1.1-201ENST00000616930 107 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC092794.2-201ENST00000620933 563 ntBASIC0.31□□□□□ -2.36
TRBV11-1A0A0K0K1C0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU6-961P-201ENST00000363893 105 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.194-201ENST00000363985 102 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU6-926P-201ENST00000384075 107 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 SNORD116-2-201ENST00000384274 95 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 SNORD116-6-201ENST00000384711 96 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU6-613P-201ENST00000410412 108 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR2053-201ENST00000459295 91 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RPL7P42-201ENST00000481005 679 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 MIR548AR-201ENST00000582191 57 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC005899.2-201ENST00000584353 90 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 AC091925.1-201ENST00000623204 462 ntBASIC0.3□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.172-201ENST00000363765 102 ntBASIC0.29□□□□□ -2.36
TRBV11-1A0A0K0K1C0 SNORD14E-201ENST00000364009 85 ntBASIC0.29□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU6-396P-201ENST00000365369 105 ntBASIC0.29□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.450-201ENST00000384198 113 ntBASIC0.29□□□□□ -2.36
TRBV11-1A0A0K0K1C0 SNORD38C-201ENST00000384381 69 ntBASIC0.29□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU6-601P-201ENST00000384540 107 ntBASIC0.29□□□□□ -2.36
TRBV11-1A0A0K0K1C0 Y_RNA.554-201ENST00000384672 102 ntBASIC0.29□□□□□ -2.36
TRBV11-1A0A0K0K1C0 RNU6-177P-201ENST00000411257 104 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms