| S4R3C0 | AC112487.2-201 | ENST00000637950 | 304 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| S4R3C0 | KIAA1551-201 | ENST00000312561 | 6230 nt | APPRIS P1 TSL 1 (best) BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | IL6ST-203 | ENST00000381287 | 8667 nt | TSL 5 BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | SLC25A46-204 | ENST00000504098 | 2345 nt | TSL 5 BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-1115P-201 | ENST00000362490 | 106 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | SNORD114-7-201 | ENST00000362520 | 77 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.27-201 | ENST00000362540 | 103 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.70-201 | ENST00000362886 | 110 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | SNORD68-201 | ENST00000363214 | 84 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | SNORA25.8-201 | ENST00000364831 | 128 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.496-201 | ENST00000384444 | 101 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | MIR618-201 | ENST00000385287 | 98 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-1009P-201 | ENST00000390996 | 107 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-1199P-201 | ENST00000411249 | 104 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | PIGPP3-201 | ENST00000425307 | 415 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | Z98949.2-201 | ENST00000440996 | 144 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | HSPE1P13-201 | ENST00000451143 | 297 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | FGF7P4-201 | ENST00000509595 | 295 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | AC111194.2-201 | ENST00000511222 | 455 nt | TSL 5 BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-947P-201 | ENST00000516264 | 106 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-911P-201 | ENST00000516523 | 104 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | SNORD116.3-201 | ENST00000517176 | 78 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | VN1R91P-201 | ENST00000594377 | 169 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | AL513534.2-201 | ENST00000603836 | 250 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | MIR4272-201 | ENST00000635924 | 64 nt | BASIC | 0.76 | □□□□□ -2.29 | | |
| S4R3C0 | MT-ND4-201 | ENST00000361381 | 1378 nt | APPRIS P1 BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | CCDC68-202 | ENST00000432185 | 4014 nt | APPRIS P1 TSL 1 (best) BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | C9orf84-201 | ENST00000318737 | 4661 nt | APPRIS P3 TSL 1 (best) BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.146-201 | ENST00000363549 | 102 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.187-201 | ENST00000363918 | 113 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.263-201 | ENST00000364659 | 114 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | MIR1287-201 | ENST00000408492 | 90 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | AL360175.1-201 | ENST00000426547 | 285 nt | TSL 5 BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | AL162725.1-201 | ENST00000435405 | 301 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | AC092755.1-201 | ENST00000441746 | 97 nt | TSL 3 BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | RPS29P28-201 | ENST00000446439 | 141 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | MTND5P20-201 | ENST00000448677 | 143 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | RNU7-152P-201 | ENST00000458982 | 64 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | RNU7-40P-201 | ENST00000516397 | 64 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.702-201 | ENST00000516843 | 96 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | AC090049.2-201 | ENST00000550377 | 109 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | AC138625.2-201 | ENST00000563968 | 551 nt | TSL 3 BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | MIR4698-201 | ENST00000577795 | 80 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | GHRLOS.1-201 | ENST00000610995 | 70 nt | BASIC | 0.75 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.226-201 | ENST00000364337 | 114 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-1175P-201 | ENST00000365200 | 107 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | RNY3P14-201 | ENST00000384309 | 102 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | MIR222-201 | ENST00000384992 | 110 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | MIR653-201 | ENST00000385279 | 96 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AL451046.2-201 | ENST00000403074 | 277 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | RNU2-61P-201 | ENST00000411069 | 191 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AC048334.1-201 | ENST00000477975 | 159 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | RPS23P4-201 | ENST00000487908 | 423 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AC108516.1-201 | ENST00000503666 | 257 nt | TSL 2 BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | SNORA31.2-201 | ENST00000516019 | 134 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-436P-201 | ENST00000516171 | 114 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AL358944.1-201 | ENST00000528537 | 144 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AC011604.1-201 | ENST00000545978 | 196 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AC120024.3-201 | ENST00000603167 | 156 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AC092447.9-201 | ENST00000603395 | 144 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AL022345.2-201 | ENST00000606307 | 135 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AC004832.4-201 | ENST00000608952 | 331 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | MIR6504-201 | ENST00000613520 | 61 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.804-201 | ENST00000615262 | 101 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | AL591926.4-201 | ENST00000616895 | 298 nt | BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | LINC01068-202 | ENST00000620874 | 626 nt | TSL 3 BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | ZNF518A-210 | ENST00000624776 | 7994 nt | APPRIS P1 TSL 1 (best) BASIC | 0.74 | □□□□□ -2.29 | | |
| S4R3C0 | PTPN22-203 | ENST00000460620 | 1794 nt | TSL 1 (best) BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.39-201 | ENST00000362620 | 98 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.329-201 | ENST00000365209 | 107 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | SNORA25-201 | ENST00000384384 | 134 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-163P-201 | ENST00000384396 | 106 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | MIR526A1-201 | ENST00000384897 | 85 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | MIR891A-201 | ENST00000401237 | 79 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | AF228730.4-201 | ENST00000421457 | 183 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | MRPL35P3-201 | ENST00000421557 | 364 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | MTND1P14-201 | ENST00000427400 | 950 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | AL353747.2-201 | ENST00000439207 | 205 nt | TSL 3 BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | OR2A41P-201 | ENST00000473586 | 105 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-322P-201 | ENST00000516010 | 103 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | RNA5SP102-201 | ENST00000516865 | 106 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | RN7SKP295-201 | ENST00000517264 | 153 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | C18orf54-203 | ENST00000578138 | 776 nt | TSL 3 BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | AC022441.3-201 | ENST00000605737 | 136 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | ST7-AS1_1.1-201 | ENST00000611142 | 116 nt | BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 0.73 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.80-201 | ENST00000362996 | 102 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.191-201 | ENST00000363972 | 113 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.230-201 | ENST00000364348 | 109 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.315-201 | ENST00000365117 | 102 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | SNORA2.2-201 | ENST00000365473 | 135 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.485-201 | ENST00000384395 | 102 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | Y_RNA.570-201 | ENST00000384750 | 101 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | RNU6-910P-201 | ENST00000390844 | 107 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | MIR1276-201 | ENST00000408707 | 83 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | AL365434.1-201 | ENST00000412362 | 380 nt | TSL 3 BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | AC236972.2-201 | ENST00000434979 | 310 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | CYCTP-201 | ENST00000504253 | 315 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | AC114811.1-201 | ENST00000507207 | 168 nt | BASIC | 0.72 | □□□□□ -2.29 | | |
| S4R3C0 | SNORA25.10-201 | ENST00000515926 | 124 nt | BASIC | 0.72 | □□□□□ -2.29 | | |