Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
COMMD3-BMI1R4GMX3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.52□□□□□ -2.33
COMMD3-BMI1R4GMX3 AL442644.1-201ENST00000454390 3105 ntBASIC0.52□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.2-201ENST00000362330 96 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.482-201ENST00000384377 111 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-342P-201ENST00000384521 104 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 MIR548K-201ENST00000408406 116 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-1148P-201ENST00000410992 104 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 AL354751.2-201ENST00000415471 210 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC116353.2-201ENST00000505332 712 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU4-49P-201ENST00000516080 140 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-720P-201ENST00000516363 108 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 MIR4714-201ENST00000580728 77 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 MIR3192-201ENST00000584920 77 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC018638.8-201ENST00000588755 281 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC006380.1-201ENST00000603598 186 ntBASIC0.51□□□□□ -2.33
COMMD3-BMI1R4GMX3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 MIR103A2-201ENST00000362154 78 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.48-201ENST00000362710 103 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.453-201ENST00000384223 109 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 SNORD89-201ENST00000390981 114 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 MIR1298-201ENST00000408783 112 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.594-201ENST00000410373 140 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC107399.1-201ENST00000451226 265 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC114811.1-201ENST00000507207 168 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU2-12P-201ENST00000517216 168 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC023442.1-201ENST00000531247 422 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 AL008636.1-201ENST00000625038 1018 ntBASIC0.5□□□□□ -2.33
COMMD3-BMI1R4GMX3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 SNORD68-201ENST00000363214 84 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 SNORD115-30-201ENST00000364117 82 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.358-201ENST00000365491 99 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.370-201ENST00000365589 108 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-318P-201ENST00000384283 103 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.466-201ENST00000384294 113 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 MIR520C-201ENST00000385005 87 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 SNORD12B-201ENST00000410433 91 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 RPS20P10-201ENST00000451209 253 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 RPL17P19-201ENST00000489069 552 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.682-201ENST00000516457 100 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 MTND4LP26-201ENST00000518144 282 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 Z83818.1-201ENST00000603584 150 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 MIR6513-201ENST00000621188 64 ntBASIC0.49□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-874P-201ENST00000362390 105 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-1301P-201ENST00000362724 104 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 SNORD14.1-201ENST00000365609 90 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.554-201ENST00000384672 102 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 SNORD111-201ENST00000408139 94 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNA5SP511-201ENST00000410487 115 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 RPL23AP50-201ENST00000434149 455 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC067940.1-201ENST00000458411 300 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 snoU13.25-201ENST00000458945 104 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-1337P-201ENST00000516525 95 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-1116P-201ENST00000517269 99 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC023827.1-201ENST00000569247 97 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC131055.1-201ENST00000584626 316 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC080013.6-201ENST00000606185 215 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 AL591926.4-201ENST00000616895 298 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 PISRT1.1-201ENST00000616930 107 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC007742.2-201ENST00000618226 398 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC092794.2-201ENST00000620933 563 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 MIR3688-2-201ENST00000636963 87 ntBASIC0.48□□□□□ -2.33
COMMD3-BMI1R4GMX3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 SNORD99-201ENST00000408612 74 ntBASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 MTND3P8-201ENST00000412909 339 ntBASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 PIGPP3-201ENST00000425307 415 ntBASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 RPS3AP52-201ENST00000435639 297 ntBASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 RNU6-1132P-201ENST00000459214 107 ntBASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC105313.1-201ENST00000509121 353 ntBASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.670-201ENST00000516255 105 ntBASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 AC109810.1-201ENST00000534066 224 ntBASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 PVT1_3.1-201ENST00000620853 95 ntBASIC0.47□□□□□ -2.33
COMMD3-BMI1R4GMX3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.46□□□□□ -2.34
COMMD3-BMI1R4GMX3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.46□□□□□ -2.34
COMMD3-BMI1R4GMX3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
COMMD3-BMI1R4GMX3 RNU6-601P-201ENST00000384540 107 ntBASIC0.46□□□□□ -2.34
COMMD3-BMI1R4GMX3 MIR216A-201ENST00000385063 110 ntBASIC0.46□□□□□ -2.34
COMMD3-BMI1R4GMX3 Y_RNA.621-201ENST00000411065 96 ntBASIC0.46□□□□□ -2.34
COMMD3-BMI1R4GMX3 AC092423.1-201ENST00000430165 186 ntBASIC0.46□□□□□ -2.34
COMMD3-BMI1R4GMX3 MTND1P4-201ENST00000435196 415 ntBASIC0.46□□□□□ -2.34
COMMD3-BMI1R4GMX3 RNA5SP480-201ENST00000516840 109 ntBASIC0.46□□□□□ -2.34
COMMD3-BMI1R4GMX3 MIR4764-201ENST00000580680 88 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms