Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SNORD14E-201ENST00000364009 85 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-533P-201ENST00000384144 107 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 SNORD116-12-201ENST00000384468 92 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 MIR196A1-201ENST00000388006 70 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 SNORA11-201ENST00000408789 128 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 RPS27AP14-201ENST00000422868 454 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 AC093303.1-201ENST00000514549 295 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 AP001330.5-201ENST00000607176 411 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 AC005609.4-201ENST00000625071 447 ntBASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.18□□□□□ -2.6
LINC01558Q9Y6Z2 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-324P-201ENST00000363957 106 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-280P-201ENST00000364145 104 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-726P-201ENST00000364680 107 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 SNORD116.1-201ENST00000365628 92 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-291P-201ENST00000384720 107 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 SNORD83B-201ENST00000386745 93 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-757P-201ENST00000410334 100 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 RNA5SP127-201ENST00000411051 133 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 RNU7-138P-201ENST00000459479 64 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 SNORA27.4-201ENST00000516650 95 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 MIR4775-201ENST00000581168 75 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 AC006441.5-201ENST00000612680 209 ntBASIC-1.19□□□□□ -2.6
LINC01558Q9Y6Z2 SNORA20.2-201ENST00000383922 131 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-784P-201ENST00000384330 106 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 SCARNA18-201ENST00000459004 134 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 RPL7P42-201ENST00000481005 679 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 AC092436.3-201ENST00000511788 257 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 AC090572.1-201ENST00000519251 160 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 AL136370.1-201ENST00000608166 691 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 MIR6082-201ENST00000613604 109 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 AL158209.2-201ENST00000619266 216 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 AC073869.9-201ENST00000641610 120 ntBASIC-1.2□□□□□ -2.6
LINC01558Q9Y6Z2 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.21□□□□□ -2.6
LINC01558Q9Y6Z2 AC236972.2-201ENST00000434979 310 ntBASIC-1.21□□□□□ -2.6
LINC01558Q9Y6Z2 RNU7-167P-201ENST00000459160 62 ntBASIC-1.21□□□□□ -2.6
LINC01558Q9Y6Z2 HSPE1P23-201ENST00000509838 286 ntBASIC-1.21□□□□□ -2.6
LINC01558Q9Y6Z2 AC105417.1-201ENST00000514691 285 ntBASIC-1.21□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-751P-201ENST00000516382 101 ntBASIC-1.21□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-765P-201ENST00000516916 99 ntBASIC-1.21□□□□□ -2.6
LINC01558Q9Y6Z2 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.21□□□□□ -2.6
LINC01558Q9Y6Z2 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.21□□□□□ -2.6
LINC01558Q9Y6Z2 SNORD115-32-201ENST00000364079 82 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-169P-201ENST00000365336 107 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-535P-201ENST00000384722 107 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-1199P-201ENST00000411249 104 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 MTND3P1-201ENST00000441336 220 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 AP003168.1-201ENST00000530091 307 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 SCOCP1-201ENST00000554676 349 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 AC011712.1-201ENST00000588959 234 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 AC080013.3-201ENST00000606839 578 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 AC104010.1-201ENST00000616889 150 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 AC072046.2-201ENST00000618366 268 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 SEPT14P19-203ENST00000633205 211 ntBASIC-1.22□□□□□ -2.6
LINC01558Q9Y6Z2 RNU6-490P-201ENST00000362985 107 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 MIR204-201ENST00000385200 110 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 SPINT5P-201ENST00000448174 155 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 RNU2-11P-201ENST00000459191 187 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 AC016550.1-201ENST00000505348 785 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 SNORA25.10-201ENST00000515926 124 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 RNU6-881P-201ENST00000516813 102 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 RNU6-410P-201ENST00000517006 107 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 LRRC34P1-201ENST00000542742 915 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 UBL5P4-201ENST00000562584 236 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 POLR3GP1-201ENST00000594073 261 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 uc_338.11-201ENST00000619132 160 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 AP002371.2-201ENST00000624450 503 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 MIR6759-201ENST00000638110 65 ntBASIC-1.23□□□□□ -2.61
LINC01558Q9Y6Z2 RNU6-403P-201ENST00000363163 104 ntBASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 MIR516B1-201ENST00000385211 90 ntBASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 MIR153-2-201ENST00000385225 87 ntBASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 UQCRBP2-201ENST00000447827 297 ntBASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 MTATP6P14-201ENST00000455189 673 ntBASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 MTCO3P38-201ENST00000468910 766 ntBASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 AC022616.4-201ENST00000522985 181 ntBASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 MIR4703-201ENST00000577728 79 ntBASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 MIR4493-201ENST00000584016 73 ntBASIC-1.24□□□□□ -2.61
LINC01558Q9Y6Z2 AC064836.2-201ENST00000609491 462 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms