Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU6-818P-201ENST00000364837 108 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-1323P-201ENST00000384025 107 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.435-201ENST00000384095 112 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-376P-201ENST00000384731 106 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 AL117342.1-201ENST00000404861 406 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-394P-201ENST00000410735 107 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 BX510359.4-201ENST00000423750 193 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 AL162725.1-201ENST00000435405 301 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 AC234781.5-201ENST00000508429 271 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 AC013791.1-201ENST00000616619 62 ntBASIC2.39□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-862P-201ENST00000362804 105 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-144P-201ENST00000383951 107 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 RNA5SP323-201ENST00000391094 133 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 AL355497.1-201ENST00000406262 551 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 RNA5SP511-201ENST00000410487 115 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 AL591806.2-201ENST00000433122 173 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 AL392103.1-201ENST00000447000 198 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 RNU7-200P-201ENST00000516105 62 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 AC007336.1-201ENST00000576365 3828 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 SNORD14A-201ENST00000606526 91 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 AC004832.4-201ENST00000608952 331 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 AC068647.2-201ENST00000637380 353 ntBASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.182-201ENST00000363880 111 ntBASIC2.37□□□□□ -2.03
PCDHB1Q9Y5F3 RNU4-17P-201ENST00000365598 141 ntBASIC2.37□□□□□ -2.03
PCDHB1Q9Y5F3 SNORD116-13-201ENST00000384408 92 ntBASIC2.37□□□□□ -2.03
PCDHB1Q9Y5F3 RNA5SP467-201ENST00000391274 118 ntBASIC2.37□□□□□ -2.03
PCDHB1Q9Y5F3 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
PCDHB1Q9Y5F3 RNU7-141P-201ENST00000459304 62 ntBASIC2.37□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-63P-201ENST00000516690 95 ntBASIC2.37□□□□□ -2.03
PCDHB1Q9Y5F3 AC015712.3-201ENST00000559380 164 ntBASIC2.37□□□□□ -2.03
PCDHB1Q9Y5F3 AP003357.1-201ENST00000604497 148 ntBASIC2.37□□□□□ -2.03
PCDHB1Q9Y5F3 AC245060.5-201ENST00000610778 3293 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.7-201ENST00000362352 102 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.293-201ENST00000364908 93 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 SNORD116-18-201ENST00000383961 92 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 MIR562-201ENST00000384894 95 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 MIR520G-201ENST00000385064 90 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-381P-201ENST00000391259 108 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 RNU7-94P-201ENST00000459576 63 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 AC108210.2-201ENST00000503681 201 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 RNU7-115P-201ENST00000516433 55 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-453P-201ENST00000516819 85 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-789P-201ENST00000517105 102 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 AC021269.2-201ENST00000532318 330 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 AC015720.1-201ENST00000565251 277 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 POLR3GP1-201ENST00000594073 261 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 AC103810.6-201ENST00000606708 136 ntBASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PCDHB1Q9Y5F3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 U8.7-201ENST00000364940 136 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 MIR1283-2-201ENST00000408621 87 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 AL356320.1-201ENST00000429616 163 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 SEPT7P4-201ENST00000437076 306 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 AC026436.1-201ENST00000510537 270 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 SCARNA8-201ENST00000515924 131 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 RNA5SP281-201ENST00000516504 135 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 DEFB122-202ENST00000569013 197 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 MIR4529-201ENST00000578110 78 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 MIR5688-201ENST00000580619 83 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 AC046143.2-201ENST00000609789 160 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 MIR548AY-201ENST00000617669 107 ntBASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHB1Q9Y5F3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 RNU1-51P-201ENST00000365345 176 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 SNORA8-201ENST00000384574 139 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 RNU6-136P-201ENST00000384663 107 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 AC117454.1-201ENST00000491120 168 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 MIR1273D-201ENST00000577266 86 ntBASIC2.34□□□□□ -2.03
PCDHB1Q9Y5F3 AC078899.2-201ENST00000595282 212 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms