Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RNU7-116P-201ENST00000516940 62 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.93□□□□□ -2.1
PKP3Q9Y446 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
PKP3Q9Y446 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PKP3Q9Y446 AC008555.8-201ENST00000623602 2168 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PKP3Q9Y446 Y_RNA.20-201ENST00000362479 113 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 RNU6-112P-201ENST00000363599 104 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 RNU6-899P-201ENST00000363947 107 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 SNORA63D-201ENST00000364359 132 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 MTCO2P33-201ENST00000402100 465 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 RNU2-14P-201ENST00000411053 191 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 RPS4XP11-201ENST00000446897 772 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 RNU7-141P-201ENST00000459304 62 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 RNA5SP57-201ENST00000459463 123 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 AC117454.1-201ENST00000491120 168 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.92□□□□□ -2.1
PKP3Q9Y446 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 MIR548AY-201ENST00000617669 107 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 snoU18.1-201ENST00000629629 71 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.92□□□□□ -2.1
PKP3Q9Y446 AC134026.1-201ENST00000623249 2239 ntBASIC1.92□□□□□ -2.1
PKP3Q9Y446 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PKP3Q9Y446 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
PKP3Q9Y446 Y_RNA.82-201ENST00000363000 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.92-201ENST00000363043 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.235-201ENST00000364412 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.267-201ENST00000364679 109 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.306-201ENST00000365015 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.312-201ENST00000365089 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.322-201ENST00000365151 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
PKP3Q9Y446 RNA5SP109-201ENST00000391010 116 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 AL512604.1-201ENST00000404812 257 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 AC245047.3-201ENST00000429428 127 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.650-201ENST00000459002 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.637-201ENST00000459424 114 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 RNU7-115P-201ENST00000516433 55 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 RNU6-341P-201ENST00000516973 96 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.777-201ENST00000516982 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 AC024405.2-202ENST00000532731 184 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 AC091178.2-201ENST00000584401 117 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 POLR3GP1-201ENST00000594073 261 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.771-201ENST00000598668 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 AC022217.4-201ENST00000604389 163 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 AP003357.1-201ENST00000604497 148 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 Y_RNA.789-201ENST00000622480 102 ntBASIC1.91□□□□□ -2.1
PKP3Q9Y446 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 U8.7-201ENST00000364940 136 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 SNORA72-201ENST00000384339 132 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 Y_RNA.476-201ENST00000384347 108 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.9□□□□□ -2.11
PKP3Q9Y446 AL445685.2-201ENST00000422551 342 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 AL606517.2-201ENST00000442855 241 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 AC233266.1-201ENST00000454518 96 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 U8.19-201ENST00000459095 133 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.9□□□□□ -2.11
PKP3Q9Y446 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.9□□□□□ -2.11
PKP3Q9Y446 RNU6-1291P-201ENST00000516591 104 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
PKP3Q9Y446 AL096840.1-201ENST00000603287 93 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 AL008718.3-201ENST00000610217 321 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 AC242852.1-201ENST00000612151 96 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 AC013791.1-201ENST00000616619 62 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 AC244015.1-201ENST00000622301 99 ntBASIC1.9□□□□□ -2.11
PKP3Q9Y446 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PKP3Q9Y446 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
PKP3Q9Y446 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.9□□□□□ -2.11
PKP3Q9Y446 Y_RNA.65-201ENST00000362846 100 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 RNU6-211P-201ENST00000384047 107 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 Y_RNA.539-201ENST00000384635 107 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 RNU6-651P-201ENST00000411040 105 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 Y_RNA.621-201ENST00000411065 96 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 RPS27P1-201ENST00000450552 247 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 SNORD2.1-201ENST00000458762 69 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 RPL23AP54-201ENST00000495129 419 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 RNU2-56P-201ENST00000516826 190 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 AC011604.1-201ENST00000545978 196 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 AC127455.1-201ENST00000565496 145 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 MIR4643-201ENST00000577473 78 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 MIR3945-201ENST00000581853 98 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
PKP3Q9Y446 AC100821.1-201ENST00000523153 2479 ntBASIC1.89□□□□□ -2.11
PKP3Q9Y446 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
PKP3Q9Y446 Y_RNA.122-201ENST00000363331 96 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 RNU6-1205P-201ENST00000363625 106 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 RNU6-950P-201ENST00000384651 107 ntBASIC1.88□□□□□ -2.11
PKP3Q9Y446 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 620.1 ms