Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNA5SP508-201ENST00000411327 119 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 RN7SL442P-201ENST00000473804 320 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 TRBV12-1-201ENST00000479785 344 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-693P-201ENST00000516134 107 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 Y_RNA.666-201ENST00000516187 112 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 AC007012.1-201ENST00000567192 175 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 MIR4769-201ENST00000584126 77 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 AC007229.1-201ENST00000590455 412 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 U2.20-201ENST00000613956 192 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 AC022149.2-201ENST00000621061 203 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 RNU1-23P-201ENST00000363361 144 ntBASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 AC060773.1-201ENST00000421698 310 ntBASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 CALM2P4-201ENST00000430810 426 ntBASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 RN7SKP132-201ENST00000516001 208 ntBASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 RNA5SP236-201ENST00000516169 116 ntBASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 MIR2276-201ENST00000516886 89 ntBASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZC3H4Q9UPT8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-851P-201ENST00000384565 107 ntBASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 AL590004.2-201ENST00000404787 371 ntBASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 AC108938.1-201ENST00000451204 136 ntBASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 AC093259.1-201ENST00000509755 300 ntBASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 uc_338.25-201ENST00000613756 156 ntBASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 AL137067.1-201ENST00000615933 120 ntBASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 MIR7843-201ENST00000622274 79 ntBASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.8□□□□□ -1.8
ZC3H4Q9UPT8 AC093010.3-201ENST00000570269 15214 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 Y_RNA.366-201ENST00000365540 102 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-1292P-201ENST00000383856 107 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 SNORD15B-201ENST00000384714 146 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 MIR570-201ENST00000384917 97 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 MIR504-201ENST00000385065 83 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 RNU11-5P-201ENST00000391216 129 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 UBBP3-201ENST00000445497 241 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 CYP2C59P-201ENST00000457790 269 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 AC068657.1-201ENST00000520807 306 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 MIR4524B-201ENST00000581569 115 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 uc_338.1-201ENST00000612113 180 ntBASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.79□□□□□ -1.8
ZC3H4Q9UPT8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 MIR126-201ENST00000362291 85 ntBASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 snoU2-30.2-201ENST00000362805 70 ntBASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-888P-201ENST00000363010 101 ntBASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 Y_RNA.281-201ENST00000364774 94 ntBASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 AC011406.1-201ENST00000512440 370 ntBASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 SCGB1D5P-201ENST00000515134 247 ntBASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 AC008507.4-201ENST00000585464 127 ntBASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ZC3H4Q9UPT8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
ZC3H4Q9UPT8 AC096644.4-201ENST00000563417 2912 ntBASIC3.78□□□□□ -1.81
ZC3H4Q9UPT8 Y_RNA.332-201ENST00000365271 113 ntBASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 Y_RNA.369-201ENST00000365568 117 ntBASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 SNORD24-201ENST00000383884 75 ntBASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 RNU6-756P-201ENST00000383997 107 ntBASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 RNA5SP136-201ENST00000410906 107 ntBASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 AC022018.1-201ENST00000430685 241 ntBASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 SNRPGP13-201ENST00000442212 177 ntBASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 RNU6-1041P-201ENST00000516254 102 ntBASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 AL590808.1-201ENST00000618696 141 ntBASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.77□□□□□ -1.81
ZC3H4Q9UPT8 RNA5SP467-201ENST00000391274 118 ntBASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 RNU7-99P-201ENST00000516271 62 ntBASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 RNU6-113P-201ENST00000516653 101 ntBASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 RNU6-56P-201ENST00000516986 93 ntBASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 Y_RNA.714-201ENST00000517065 90 ntBASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 AP006437.1-201ENST00000641440 3685 ntBASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.76□□□□□ -1.81
ZC3H4Q9UPT8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 Y_RNA.85-201ENST00000363014 111 ntBASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 Y_RNA.549-201ENST00000384657 102 ntBASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 SNORD77.3-201ENST00000391113 65 ntBASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 EDDM3CP-201ENST00000415977 425 ntBASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 MICF-203ENST00000432679 129 ntBASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 AL359075.3-201ENST00000613288 217 ntBASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 MIR6079-201ENST00000635807 62 ntBASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.75□□□□□ -1.81
ZC3H4Q9UPT8 MIR22-201ENST00000362190 85 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms