Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHROOM4Q9ULL8 Y_RNA.39-201ENST00000362620 98 ntBASIC2.29□□□□□ -2.04
SHROOM4Q9ULL8 Y_RNA.230-201ENST00000364348 109 ntBASIC2.29□□□□□ -2.04
SHROOM4Q9ULL8 AC092447.9-201ENST00000603395 144 ntBASIC2.29□□□□□ -2.04
SHROOM4Q9ULL8 LARP7P1-201ENST00000605576 316 ntBASIC2.29□□□□□ -2.04
SHROOM4Q9ULL8 AL008636.1-201ENST00000625038 1018 ntBASIC2.29□□□□□ -2.04
SHROOM4Q9ULL8 SNORD3E-202ENST00000627253 216 ntBASIC2.29□□□□□ -2.04
SHROOM4Q9ULL8 RNU6-324P-201ENST00000363957 106 ntBASIC2.28□□□□□ -2.04
SHROOM4Q9ULL8 Y_RNA.252-201ENST00000364556 101 ntBASIC2.28□□□□□ -2.04
SHROOM4Q9ULL8 AL135790.2-201ENST00000437701 267 ntBASIC2.28□□□□□ -2.04
SHROOM4Q9ULL8 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
SHROOM4Q9ULL8 RNU6-113P-201ENST00000516653 101 ntBASIC2.28□□□□□ -2.04
SHROOM4Q9ULL8 MIR4795-201ENST00000584182 89 ntBASIC2.28□□□□□ -2.04
SHROOM4Q9ULL8 Y_RNA.804-201ENST00000615262 101 ntBASIC2.28□□□□□ -2.04
SHROOM4Q9ULL8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.27□□□□□ -2.05
SHROOM4Q9ULL8 RNA5SP482-201ENST00000391269 118 ntBASIC2.27□□□□□ -2.05
SHROOM4Q9ULL8 AC022028.1-201ENST00000412054 408 ntBASIC2.27□□□□□ -2.05
SHROOM4Q9ULL8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.27□□□□□ -2.05
SHROOM4Q9ULL8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM4Q9ULL8 AL358944.1-201ENST00000528537 144 ntBASIC2.27□□□□□ -2.05
SHROOM4Q9ULL8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM4Q9ULL8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM4Q9ULL8 MIR373-201ENST00000362273 69 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.197-201ENST00000364004 102 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.315-201ENST00000365117 102 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 MIR758-201ENST00000390227 88 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 STAG3L5P-204ENST00000443759 179 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 AC233266.1-201ENST00000454518 96 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 AC093027.1-201ENST00000546698 429 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.772-201ENST00000606692 102 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 AL365434.2-201ENST00000607979 234 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 AC242852.1-201ENST00000612151 96 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 AC244015.1-201ENST00000622301 99 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 RNU4-79P-201ENST00000362764 141 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.101-201ENST00000363154 102 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 RNU1-115P-201ENST00000365329 160 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 RNU5A-5P-201ENST00000411054 116 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 RNU6-1170P-201ENST00000515974 106 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 PRR13P7-201ENST00000605538 430 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 AC011476.5-201ENST00000615594 130 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 AC091925.1-201ENST00000623204 462 ntBASIC2.26□□□□□ -2.05
SHROOM4Q9ULL8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SHROOM4Q9ULL8 SNORD115-30-201ENST00000364117 82 ntBASIC2.25□□□□□ -2.05
SHROOM4Q9ULL8 RNU6-708P-201ENST00000384217 107 ntBASIC2.25□□□□□ -2.05
SHROOM4Q9ULL8 MTND4LP11-201ENST00000422184 280 ntBASIC2.25□□□□□ -2.05
SHROOM4Q9ULL8 SNORA40.14-201ENST00000516543 86 ntBASIC2.25□□□□□ -2.05
SHROOM4Q9ULL8 AL606534.2-204ENST00000635008 178 ntBASIC2.25□□□□□ -2.05
SHROOM4Q9ULL8 MIR4272-201ENST00000635924 64 ntBASIC2.25□□□□□ -2.05
SHROOM4Q9ULL8 RNU6-117P-201ENST00000365415 107 ntBASIC2.24□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.431-201ENST00000384086 102 ntBASIC2.24□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.446-201ENST00000384178 104 ntBASIC2.24□□□□□ -2.05
SHROOM4Q9ULL8 RNU6-505P-201ENST00000384427 107 ntBASIC2.24□□□□□ -2.05
SHROOM4Q9ULL8 AL390729.2-201ENST00000416137 156 ntBASIC2.24□□□□□ -2.05
SHROOM4Q9ULL8 AF228730.4-201ENST00000421457 183 ntBASIC2.24□□□□□ -2.05
SHROOM4Q9ULL8 RPS27P16-201ENST00000425758 201 ntBASIC2.24□□□□□ -2.05
SHROOM4Q9ULL8 RAB11AP2-201ENST00000545905 639 ntBASIC2.24□□□□□ -2.05
SHROOM4Q9ULL8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SHROOM4Q9ULL8 RNU6-1115P-201ENST00000362490 106 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.526-201ENST00000384572 110 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 RNU6-997P-201ENST00000384725 107 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.579-201ENST00000390939 94 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 AL031003.1-201ENST00000404229 172 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 SDAD1P3-201ENST00000427380 333 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 AL160004.2-201ENST00000432935 350 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 MTATP6P23-201ENST00000440153 476 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 RNU6-155P-201ENST00000516347 100 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 RNA5SP168-201ENST00000516642 112 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 AC055872.1-201ENST00000570978 278 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 AC010205.1-201ENST00000616668 449 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 U6.92-201ENST00000636464 89 ntBASIC2.23□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.5-201ENST00000362334 102 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 Y_RNA.124-201ENST00000363339 93 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 MIR660-201ENST00000385235 97 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 RNA5SP511-201ENST00000410487 115 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 CHEK2P4-201ENST00000450340 246 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 RPS29P23-201ENST00000458635 123 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 RNU1-98P-201ENST00000458992 160 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 RNU6-1337P-201ENST00000516525 95 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 RNU6-1291P-201ENST00000516591 104 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 AC022441.3-201ENST00000605737 136 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 MIR8065-201ENST00000620577 100 ntBASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.22□□□□□ -2.05
SHROOM4Q9ULL8 SNORA1B-201ENST00000362535 133 ntBASIC2.21□□□□□ -2.06
SHROOM4Q9ULL8 Y_RNA.361-201ENST00000365515 120 ntBASIC2.21□□□□□ -2.06
SHROOM4Q9ULL8 RNU6-436P-201ENST00000516171 114 ntBASIC2.21□□□□□ -2.06
SHROOM4Q9ULL8 RNU6-63P-201ENST00000516690 95 ntBASIC2.21□□□□□ -2.06
SHROOM4Q9ULL8 Y_RNA.713-201ENST00000517013 96 ntBASIC2.21□□□□□ -2.06
SHROOM4Q9ULL8 AL513534.2-201ENST00000603836 250 ntBASIC2.21□□□□□ -2.06
SHROOM4Q9ULL8 AC006157.1-201ENST00000611750 366 ntBASIC2.21□□□□□ -2.06
SHROOM4Q9ULL8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 RNU7-12P-201ENST00000516030 62 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 RNU6-1096P-201ENST00000517089 102 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 AC104985.2-201ENST00000620598 500 ntBASIC2.2□□□□□ -2.06
SHROOM4Q9ULL8 RNU4-76P-201ENST00000364509 141 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms