Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 AC016907.1-201ENST00000419483 435 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.6□□□□□ -2.31
NUP50Q9UKX7 AL162725.1-201ENST00000435405 301 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 ELOCP24-201ENST00000456370 334 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 RNU6-329P-201ENST00000459618 107 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 AC093534.1-201ENST00000504977 132 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 AP003716.2-201ENST00000528260 108 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 AC131055.1-201ENST00000584626 316 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 AC011712.1-201ENST00000588959 234 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 AC007014.2-201ENST00000615581 479 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 AL591926.4-201ENST00000616895 298 ntBASIC0.6□□□□□ -2.31
NUP50Q9UKX7 Y_RNA.393-201ENST00000383936 102 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 MIR516B2-201ENST00000385190 85 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 MIR548K-201ENST00000408406 116 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 MIR548F5-201ENST00000408421 86 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.59□□□□□ -2.31
NUP50Q9UKX7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.59□□□□□ -2.31
NUP50Q9UKX7 AC093019.1-201ENST00000443135 252 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 RNU6-720P-201ENST00000516363 108 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 DEFB108E-201ENST00000524692 240 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 AC080013.6-201ENST00000606185 215 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 SEPT14P17-201ENST00000617978 177 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 MIR3688-2-201ENST00000636963 87 ntBASIC0.59□□□□□ -2.31
NUP50Q9UKX7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
NUP50Q9UKX7 U8.5-201ENST00000364528 136 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 RNU6-593P-201ENST00000364716 112 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 MIR216A-201ENST00000385063 110 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 MIR1185-1-201ENST00000408598 86 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 RPS3AP52-201ENST00000435639 297 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 AC117454.1-201ENST00000491120 168 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 AC113410.1-201ENST00000505029 247 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 RNU7-41P-201ENST00000515917 61 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 AC109810.1-201ENST00000534066 224 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 AC009229.3-201ENST00000608056 282 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 MIR6513-201ENST00000621188 64 ntBASIC0.58□□□□□ -2.32
NUP50Q9UKX7 Y_RNA.3-201ENST00000362331 103 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 SNORD115-30-201ENST00000364117 82 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 RNU6-1297P-201ENST00000384415 104 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 MIR520C-201ENST00000385005 87 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 SNORD12B-201ENST00000410433 91 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 AC092423.1-201ENST00000430165 186 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.57□□□□□ -2.32
NUP50Q9UKX7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.57□□□□□ -2.32
NUP50Q9UKX7 RNU6-1337P-201ENST00000516525 95 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 Y_RNA.708-201ENST00000516950 96 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 SNORA74.3-201ENST00000517108 154 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 RNU2-12P-201ENST00000517216 168 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 RN7SL793P-201ENST00000583259 296 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 MIR4762-201ENST00000585261 75 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 AC018638.8-201ENST00000588755 281 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.57□□□□□ -2.32
NUP50Q9UKX7 AC090517.2-201ENST00000614966 680 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 U4.5-201ENST00000617137 123 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
NUP50Q9UKX7 RNU6-1301P-201ENST00000362724 104 ntBASIC0.56□□□□□ -2.32
NUP50Q9UKX7 RNU6-1310P-201ENST00000384153 107 ntBASIC0.56□□□□□ -2.32
NUP50Q9UKX7 Y_RNA.453-201ENST00000384223 109 ntBASIC0.56□□□□□ -2.32
NUP50Q9UKX7 Y_RNA.516-201ENST00000384541 124 ntBASIC0.56□□□□□ -2.32
NUP50Q9UKX7 SNORD115-47-201ENST00000391226 86 ntBASIC0.56□□□□□ -2.32
NUP50Q9UKX7 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
NUP50Q9UKX7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.56□□□□□ -2.32
NUP50Q9UKX7 RPL23AP50-201ENST00000434149 455 ntBASIC0.56□□□□□ -2.32
NUP50Q9UKX7 RPL7P42-201ENST00000481005 679 ntBASIC0.56□□□□□ -2.32
NUP50Q9UKX7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.56□□□□□ -2.32
NUP50Q9UKX7 AC055872.1-201ENST00000570978 278 ntBASIC0.56□□□□□ -2.32
NUP50Q9UKX7 Y_RNA.404-201ENST00000383978 102 ntBASIC0.55□□□□□ -2.32
NUP50Q9UKX7 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
NUP50Q9UKX7 U7.7-201ENST00000459276 60 ntBASIC0.55□□□□□ -2.32
NUP50Q9UKX7 RNU6-408P-201ENST00000515910 100 ntBASIC0.55□□□□□ -2.32
NUP50Q9UKX7 MTND4LP26-201ENST00000518144 282 ntBASIC0.55□□□□□ -2.32
NUP50Q9UKX7 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
NUP50Q9UKX7 AC004467.1-201ENST00000615678 330 ntBASIC0.55□□□□□ -2.32
NUP50Q9UKX7 7SK.10-201ENST00000621414 298 ntBASIC0.55□□□□□ -2.32
NUP50Q9UKX7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
NUP50Q9UKX7 Y_RNA.86-201ENST00000363020 111 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 Y_RNA.339-201ENST00000365325 102 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 SNORD14.1-201ENST00000365609 90 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 RNU6-601P-201ENST00000384540 107 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 RNY1P4-201ENST00000384595 115 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 MIR136-201ENST00000385207 82 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 AL589823.1-201ENST00000429577 183 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 MTND3P10-201ENST00000450967 341 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 AC098869.1-201ENST00000481627 292 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 SNORA25.10-201ENST00000515926 124 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 RN7SKP164-201ENST00000516138 266 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 SNORA18.7-201ENST00000516910 131 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 MIR4764-201ENST00000580680 88 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 RNU6-94P-201ENST00000607728 107 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 MIR1244-1-201ENST00000612829 85 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 MIR1244-3-201ENST00000635744 85 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 MIR1244-2-201ENST00000636449 85 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 MIR1244-4-202ENST00000636813 85 ntBASIC0.54□□□□□ -2.32
NUP50Q9UKX7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.54□□□□□ -2.32
NUP50Q9UKX7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
NUP50Q9UKX7 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 RNU6-623P-201ENST00000363143 105 ntBASIC0.53□□□□□ -2.32
NUP50Q9UKX7 RNU6-961P-201ENST00000363893 105 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms