Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC003989.2-201ENST00000440224 169 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 HSPE1P13-201ENST00000451143 297 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 AC025033.1-201ENST00000463883 194 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 RPS27P22-201ENST00000478056 241 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 AC097462.1-201ENST00000514125 324 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.680-201ENST00000516441 93 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 AC037487.3-201ENST00000606668 112 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 AC084768.2-201ENST00000622736 221 ntBASIC2.27□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.172-201ENST00000363765 102 ntBASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.350-201ENST00000365409 98 ntBASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 RNU6-42P-201ENST00000384165 107 ntBASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 RNA5SP467-201ENST00000391274 118 ntBASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 RNU6-710P-201ENST00000410424 105 ntBASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 CST2P1-201ENST00000425770 87 ntBASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 RPL39P38-201ENST00000467018 153 ntBASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 RNU6-1337P-201ENST00000516525 95 ntBASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 MIR4713-201ENST00000582691 75 ntBASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
HDAC9Q9UKV0 UBE2WP1-201ENST00000362030 340 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.310-201ENST00000365063 113 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.352-201ENST00000365439 102 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.368-201ENST00000365547 113 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.447-201ENST00000384184 113 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 MT-TG-201ENST00000387429 68 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 AL627390.1-201ENST00000396055 340 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 AC009310.1-201ENST00000414414 451 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 RNA5SP57-201ENST00000459463 123 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 AC107393.1-201ENST00000512403 346 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 RNA5SP480-201ENST00000516840 109 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 DNAJC19P9-201ENST00000555084 351 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 AC002984.1-201ENST00000591692 448 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 AC010900.2-201ENST00000604508 210 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 MIR6504-201ENST00000613520 61 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.25□□□□□ -2.05
HDAC9Q9UKV0 RNU6-514P-201ENST00000384208 107 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 RNU4-52P-201ENST00000384209 138 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 SNORD116-13-201ENST00000384408 92 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 MIR613-201ENST00000385248 95 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 MIR676-201ENST00000390702 67 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 SNORA48.1-201ENST00000390879 135 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 SNORA67.5-201ENST00000391036 107 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 AL603910.2-201ENST00000407268 136 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 RNU6-855P-201ENST00000410395 104 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 RNA5SP501-201ENST00000410990 112 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 EBAG9P1-201ENST00000418955 543 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 HMGN2P19-201ENST00000425149 265 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 AC024067.1-201ENST00000426199 223 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 AC010409.1-201ENST00000487382 476 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 SNORA27.4-201ENST00000516650 95 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 MIR8081-201ENST00000611533 95 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.24□□□□□ -2.05
HDAC9Q9UKV0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.44-201ENST00000362676 108 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 RNU6-801P-201ENST00000364087 105 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.217-201ENST00000364214 105 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.275-201ENST00000364726 110 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.456-201ENST00000384232 111 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 RNU6-1248P-201ENST00000391096 64 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 MIR548H3-201ENST00000408771 118 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.618-201ENST00000410949 107 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.641-201ENST00000459414 105 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 RNVU1-2-201ENST00000516326 135 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 RNU7-172P-201ENST00000517125 64 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 MIR3128-201ENST00000581957 66 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 AL078603.1-201ENST00000603824 313 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 AC004832.4-201ENST00000608952 331 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 AL359075.3-201ENST00000613288 217 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 AP000553.5-201ENST00000641933 54 ntBASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDAC9Q9UKV0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 Y_RNA.416-201ENST00000384014 113 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 MIR515-2-201ENST00000384883 83 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 MIR515-1-201ENST00000384884 83 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 MIR9-3-201ENST00000385084 90 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 MIR1276-201ENST00000408707 83 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 RNA5SP338-201ENST00000410495 85 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 RPS20P10-201ENST00000451209 253 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 RPS26P45-201ENST00000471748 340 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 RNU7-99P-201ENST00000516271 62 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 RNU6-63P-201ENST00000516690 95 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 AC136628.3-201ENST00000521868 290 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 MIR4303-201ENST00000581299 66 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 AL512605.2-201ENST00000592972 256 ntBASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.22□□□□□ -2.05
HDAC9Q9UKV0 AL512598.1-201ENST00000610158 273 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms