Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNORA8.3-201ENST00000384679 139 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 MIR1287-201ENST00000408492 90 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 RNU7-115P-201ENST00000516433 55 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 MRPS18CP4-201ENST00000535821 231 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 AP003357.1-201ENST00000604497 148 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
DKK3Q9UBP4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
DKK3Q9UBP4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
DKK3Q9UBP4 U8.7-201ENST00000364940 136 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 Y_RNA.441-201ENST00000384123 112 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 RNU6-381P-201ENST00000391259 108 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 MIR548M-201ENST00000408260 86 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 AC009238.1-201ENST00000442165 424 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 AC009237.6-201ENST00000446969 424 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 RNU1-131P-201ENST00000458943 161 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.33□□□□□ -2.04
DKK3Q9UBP4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.33□□□□□ -2.04
DKK3Q9UBP4 RNU6-1219P-201ENST00000516143 112 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 RNA5SP281-201ENST00000516504 135 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 RNU7-116P-201ENST00000516940 62 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 AL137100.2-201ENST00000555786 315 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 MIR4287-201ENST00000579398 78 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 AC005972.2-201ENST00000604690 348 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 AC004832.4-201ENST00000608952 331 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 Y_RNA.802-201ENST00000614892 130 ntBASIC2.33□□□□□ -2.04
DKK3Q9UBP4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DKK3Q9UBP4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
DKK3Q9UBP4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 Y_RNA.118-201ENST00000363300 101 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 RNU6-1205P-201ENST00000363625 106 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 RNU6-103P-201ENST00000363686 107 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 SNORD116-13-201ENST00000384408 92 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 AL353689.1-201ENST00000438895 199 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 AC055731.1-201ENST00000474387 401 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 RN7SKP164-201ENST00000516138 266 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.32□□□□□ -2.04
DKK3Q9UBP4 AC002984.1-201ENST00000591692 448 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 MIR548AY-201ENST00000617669 107 ntBASIC2.32□□□□□ -2.04
DKK3Q9UBP4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DKK3Q9UBP4 AL356292.1-201ENST00000283110 373 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 SNORD114-1-201ENST00000362705 72 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 Y_RNA.75-201ENST00000362927 97 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 RNU1-22P-201ENST00000363334 158 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 RNU6-312P-201ENST00000364629 107 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 Y_RNA.293-201ENST00000364908 93 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 RNU6-746P-201ENST00000384112 109 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 RN7SKP51-201ENST00000410781 304 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 EDDM3CP-201ENST00000415977 425 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 AC060773.1-201ENST00000421698 310 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 AC018634.1-201ENST00000437554 401 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 HSPE1P21-201ENST00000438283 308 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 RPL23AP42-201ENST00000471152 471 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 RPS27P22-201ENST00000478056 241 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 AC074198.2-201ENST00000508153 258 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 AC108729.3-201ENST00000513484 108 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 RNU6-255P-201ENST00000516957 105 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 MIR1273D-201ENST00000577266 86 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 AC078899.2-201ENST00000595282 212 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.31□□□□□ -2.04
DKK3Q9UBP4 U6.73-201ENST00000619194 103 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 AC068647.2-201ENST00000637380 353 ntBASIC2.31□□□□□ -2.04
DKK3Q9UBP4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
DKK3Q9UBP4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
DKK3Q9UBP4 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 MIR676-201ENST00000390702 67 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 RNU6-394P-201ENST00000410735 107 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 RPS15AP28-201ENST00000435088 386 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 AL162725.1-201ENST00000435405 301 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
DKK3Q9UBP4 AL392103.1-201ENST00000447000 198 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.3□□□□□ -2.04
DKK3Q9UBP4 RNU6-1278P-201ENST00000516130 107 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 SNORA31.25-201ENST00000517242 134 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 AC027419.1-201ENST00000522976 328 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 AC127455.1-201ENST00000565496 145 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
DKK3Q9UBP4 AL353149.1-201ENST00000610667 244 ntBASIC2.3□□□□□ -2.04
DKK3Q9UBP4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
DKK3Q9UBP4 Y_RNA.23-201ENST00000362496 106 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 RNU1-96P-201ENST00000364163 162 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 RNU2-2P-201ENST00000410396 191 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 SNORA36B-201ENST00000410438 131 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 AL356379.1-201ENST00000414105 126 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 AC117454.1-201ENST00000491120 168 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 AC005840.1-201ENST00000498412 377 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 AC011406.1-201ENST00000512440 370 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 AC097462.1-201ENST00000514125 324 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 RNU2-19P-201ENST00000517288 84 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 AC015720.1-201ENST00000565251 277 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 MIR4529-201ENST00000578110 78 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 MIR4724-201ENST00000579485 89 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 MIR4438-201ENST00000585271 93 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 POLR3GP1-201ENST00000594073 261 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 RNU2-4P-201ENST00000606190 192 ntBASIC2.29□□□□□ -2.04
DKK3Q9UBP4 AC108706.1-201ENST00000611053 297 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms