Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC093913.1-201ENST00000614178 329 ntBASIC0.34□□□□□ -2.36
CCDC88CQ9P219 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
CCDC88CQ9P219 AC073869.6-201ENST00000640656 341 ntBASIC0.34□□□□□ -2.36
CCDC88CQ9P219 MIR103A2-201ENST00000362154 78 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.48-201ENST00000362710 103 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.157-201ENST00000363638 102 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.172-201ENST00000363765 102 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.184-201ENST00000363884 108 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.361-201ENST00000365515 120 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.530-201ENST00000384587 101 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 SNORA69.1-201ENST00000390904 137 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU2-54P-201ENST00000410299 190 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 AL353997.1-201ENST00000432936 108 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 AC114811.1-201ENST00000507207 168 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 MTND2P38-201ENST00000522536 667 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 7SK.10-201ENST00000621414 298 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.33□□□□□ -2.36
CCDC88CQ9P219 AC005592.1-201ENST00000566527 1640 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU6-1059P-201ENST00000363752 98 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.294-201ENST00000364916 102 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.405-201ENST00000383979 100 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.451-201ENST00000384200 100 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 SNORA20B-201ENST00000384220 132 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.524-201ENST00000384564 100 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU6-136P-201ENST00000384663 107 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.561-201ENST00000384694 100 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU6-1067P-201ENST00000384752 107 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 MIR520C-201ENST00000385005 87 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 MIR1302-7-201ENST00000408841 72 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU6-1050P-201ENST00000410388 107 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU7-21P-201ENST00000459430 62 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.33□□□□□ -2.36
CCDC88CQ9P219 AC113410.1-201ENST00000505029 247 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU4-54P-201ENST00000516428 129 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU6-341P-201ENST00000516973 96 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 RNU6-1116P-201ENST00000517269 99 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 MIR548AR-201ENST00000582191 57 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 AC018638.8-201ENST00000588755 281 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 MIR1244-1-201ENST00000612829 85 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 AC073349.3-201ENST00000617616 186 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 AC087588.2-201ENST00000617667 426 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 MIR1244-3-201ENST00000635744 85 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 MIR1244-2-201ENST00000636449 85 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 MIR1244-4-202ENST00000636813 85 ntBASIC0.33□□□□□ -2.36
CCDC88CQ9P219 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.33□□□□□ -2.36
CCDC88CQ9P219 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CCDC88CQ9P219 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RNU6-1266P-201ENST00000362794 105 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RNU6-801P-201ENST00000364087 105 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.336-201ENST00000365307 109 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 SNORA2B-201ENST00000384583 137 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RNU6-1304P-201ENST00000411374 106 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 AL354751.2-201ENST00000415471 210 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 MTCO3P19-201ENST00000415864 321 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 AC016907.1-201ENST00000419483 435 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC88CQ9P219 MTND3P10-201ENST00000450967 341 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 SUMO1P2-201ENST00000452524 304 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 U7.7-201ENST00000459276 60 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 AC002350.1-201ENST00000490759 375 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 SNORA25.10-201ENST00000515926 124 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RNU6-1114P-201ENST00000516022 107 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RNU6-718P-201ENST00000516166 105 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RNU6-720P-201ENST00000516363 108 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RNU6-1337P-201ENST00000516525 95 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RNU7-28P-201ENST00000516759 62 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 MIR2355-201ENST00000517199 87 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RPL21P9-201ENST00000556149 474 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 AC022441.3-201ENST00000605737 136 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 AC080013.6-201ENST00000606185 215 ntBASIC0.32□□□□□ -2.36
CCDC88CQ9P219 RNU6-874P-201ENST00000362390 105 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.80-201ENST00000362996 102 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 RNU6-1335P-201ENST00000365426 107 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.485-201ENST00000384395 102 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 SNORD116-29-201ENST00000384516 83 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 RNU6-601P-201ENST00000384540 107 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 MIR1298-201ENST00000408783 112 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 SNORD12B-201ENST00000410433 91 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 CALM2P4-201ENST00000430810 426 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 RPL7P42-201ENST00000481005 679 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 RNU6-197P-201ENST00000516680 100 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 SNORA18.7-201ENST00000516910 131 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 RNU6-1314P-201ENST00000517139 104 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 MIR4762-201ENST00000585261 75 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 AC005972.2-201ENST00000604690 348 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.31□□□□□ -2.36
CCDC88CQ9P219 RNU6-1301P-201ENST00000362724 104 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.124-201ENST00000363339 93 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 SNORD115-30-201ENST00000364117 82 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 SNORD113.3-201ENST00000364630 78 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 Y_RNA.516-201ENST00000384541 124 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 RNA5SP63-201ENST00000391225 112 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CCDC88CQ9P219 SNORD111-201ENST00000408139 94 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 MLLT10P1-201ENST00000418346 262 ntBASIC0.31□□□□□ -2.36
CCDC88CQ9P219 UBE2V1P7-201ENST00000446395 340 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms