Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 AC015720.1-201ENST00000565251 277 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 POLR3GP1-201ENST00000594073 261 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 AL365265.1-201ENST00000621045 234 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR6873-201ENST00000622788 63 ntBASIC2.37□□□□□ -2.03
CALCOCO1Q9P1Z2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 Y_RNA.262-201ENST00000364641 102 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 Y_RNA.308-201ENST00000365043 101 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 SNORA8-201ENST00000384574 139 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 HMGN2P39-201ENST00000398005 273 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 AL117342.1-201ENST00000404861 406 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR1289-2-201ENST00000408360 111 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 SNORA11.4-201ENST00000408823 129 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU7-99P-201ENST00000516271 62 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU7-115P-201ENST00000516433 55 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 AC011921.3-201ENST00000605540 361 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR548AY-201ENST00000617669 107 ntBASIC2.36□□□□□ -2.03
CALCOCO1Q9P1Z2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR411-201ENST00000362239 96 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU6-923P-201ENST00000364753 107 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 AL356379.1-201ENST00000414105 126 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 CST2P1-201ENST00000425770 87 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 AL162725.1-201ENST00000435405 301 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 AC099677.2-201ENST00000436385 175 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 AL021397.1-201ENST00000451806 248 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 COX6CP14-201ENST00000469580 174 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 RN7SL274P-201ENST00000492268 272 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 AC005786.1-201ENST00000588553 154 ntBASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CALCOCO1Q9P1Z2 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 Y_RNA.304-201ENST00000365011 112 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 MIR221-201ENST00000385135 110 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 Y_RNA.793-201ENST00000411222 111 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 Z98949.2-201ENST00000440996 144 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 AL138752.1-201ENST00000452964 351 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 RPL36AP21-201ENST00000490372 323 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 RPL23AP54-201ENST00000495129 419 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 RNU7-116P-201ENST00000516940 62 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 AC012493.3-201ENST00000604494 112 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.34□□□□□ -2.03
CALCOCO1Q9P1Z2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CALCOCO1Q9P1Z2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 RNU4-10P-201ENST00000364383 140 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 RNU6-1323P-201ENST00000384025 107 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 MIR515-2-201ENST00000384883 83 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 MIR515-1-201ENST00000384884 83 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 RNU6-493P-201ENST00000391321 108 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 SNORA36B-201ENST00000410438 131 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 Y_RNA.621-201ENST00000411065 96 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 snoU13.23-201ENST00000458863 104 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 SNORA81.3-201ENST00000517283 198 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 MIR5094-201ENST00000578766 85 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 AP003357.1-201ENST00000604497 148 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CALCOCO1Q9P1Z2 Y_RNA.29-201ENST00000362570 113 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 MIR17-201ENST00000385012 84 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 MIR764-201ENST00000390811 85 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 RNA5SP465-201ENST00000391195 109 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 RNU11-5P-201ENST00000391216 129 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 MIR1283-2-201ENST00000408621 87 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 RPS4XP11-201ENST00000446897 772 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 AC233266.1-201ENST00000454518 96 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 Y_RNA.644-201ENST00000459006 113 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 AL163195.1-201ENST00000496941 348 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 Y_RNA.674-201ENST00000516362 113 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 RNU6-1096P-201ENST00000517089 102 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 RNU7-128P-201ENST00000517247 62 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 AC242852.1-201ENST00000612151 96 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 AC244015.1-201ENST00000622301 99 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 AC022513.1-201ENST00000624512 117 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 U6.108-201ENST00000637764 58 ntBASIC2.32□□□□□ -2.04
CALCOCO1Q9P1Z2 Y_RNA.267-201ENST00000364679 109 ntBASIC2.31□□□□□ -2.04
CALCOCO1Q9P1Z2 SUMO2P12-201ENST00000405924 140 ntBASIC2.31□□□□□ -2.04
CALCOCO1Q9P1Z2 AC091021.1-201ENST00000468051 388 ntBASIC2.31□□□□□ -2.04
CALCOCO1Q9P1Z2 RNU6-182P-201ENST00000516970 105 ntBASIC2.31□□□□□ -2.04
CALCOCO1Q9P1Z2 AC024995.1-201ENST00000523014 93 ntBASIC2.31□□□□□ -2.04
CALCOCO1Q9P1Z2 Z83818.1-201ENST00000603584 150 ntBASIC2.31□□□□□ -2.04
CALCOCO1Q9P1Z2 Y_RNA.802-201ENST00000614892 130 ntBASIC2.31□□□□□ -2.04
CALCOCO1Q9P1Z2 AC068700.1-201ENST00000565862 3754 ntBASIC2.31□□□□□ -2.04
CALCOCO1Q9P1Z2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CALCOCO1Q9P1Z2 Y_RNA.24-201ENST00000362508 103 ntBASIC2.3□□□□□ -2.04
CALCOCO1Q9P1Z2 RNU6-653P-201ENST00000363074 106 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms