Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC090425.1-201ENST00000610007 140 ntBASIC2.28□□□□□ -2.04
MKS1Q9NXB0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.28□□□□□ -2.04
MKS1Q9NXB0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
MKS1Q9NXB0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
MKS1Q9NXB0 SNORA5B-201ENST00000363786 132 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 RNU6-674P-201ENST00000363831 107 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 RNU6-1318P-201ENST00000365389 103 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 RNU6-1080P-201ENST00000383982 107 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 RNU6-440P-201ENST00000390882 105 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 MIR1298-201ENST00000408783 112 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 Y_RNA.626-201ENST00000411288 95 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.27□□□□□ -2.05
MKS1Q9NXB0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.27□□□□□ -2.05
MKS1Q9NXB0 RNA5SP57-201ENST00000459463 123 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 SNORA31.17-201ENST00000516953 127 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.27□□□□□ -2.05
MKS1Q9NXB0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 AL773524.1-201ENST00000614065 229 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 CTSLP2-204ENST00000629029 392 ntBASIC2.27□□□□□ -2.05
MKS1Q9NXB0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MKS1Q9NXB0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
MKS1Q9NXB0 Y_RNA.200-201ENST00000364018 102 ntBASIC2.26□□□□□ -2.05
MKS1Q9NXB0 AC009310.1-201ENST00000414414 451 ntBASIC2.26□□□□□ -2.05
MKS1Q9NXB0 AC234781.5-201ENST00000508429 271 ntBASIC2.26□□□□□ -2.05
MKS1Q9NXB0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.26□□□□□ -2.05
MKS1Q9NXB0 SNORA31.10-201ENST00000516482 106 ntBASIC2.26□□□□□ -2.05
MKS1Q9NXB0 RNU2-56P-201ENST00000516826 190 ntBASIC2.26□□□□□ -2.05
MKS1Q9NXB0 MIR4319-201ENST00000577285 85 ntBASIC2.26□□□□□ -2.05
MKS1Q9NXB0 AC130289.1-201ENST00000577321 73 ntBASIC2.26□□□□□ -2.05
MKS1Q9NXB0 Y_RNA.802-201ENST00000614892 130 ntBASIC2.26□□□□□ -2.05
MKS1Q9NXB0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.25□□□□□ -2.05
MKS1Q9NXB0 AC062016.1-201ENST00000355719 319 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 RNU6-653P-201ENST00000363074 106 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 Y_RNA.199-201ENST00000364014 102 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 Y_RNA.203-201ENST00000364106 102 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 RNU4-10P-201ENST00000364383 140 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 Y_RNA.262-201ENST00000364641 102 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 SNORA4.2-201ENST00000365313 147 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 RNU6-301P-201ENST00000384277 107 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 RNU6-950P-201ENST00000384651 107 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 MIR526A2-201ENST00000390198 65 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 RNA5SP184-201ENST00000411071 108 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 HSPE1P9-201ENST00000440046 311 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.25□□□□□ -2.05
MKS1Q9NXB0 AL049830.1-201ENST00000468034 425 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 RNA5SP481-201ENST00000516814 122 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 RNU6-794P-201ENST00000517261 64 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 AC100767.1-201ENST00000528178 123 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 MIR4287-201ENST00000579398 78 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 MIR5688-201ENST00000580619 83 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 AC002984.1-201ENST00000591692 448 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 AC009831.4-201ENST00000620744 325 ntBASIC2.25□□□□□ -2.05
MKS1Q9NXB0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
MKS1Q9NXB0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
MKS1Q9NXB0 SNORA8.3-201ENST00000384679 139 ntBASIC2.24□□□□□ -2.05
MKS1Q9NXB0 RNA5SP24-201ENST00000516478 95 ntBASIC2.24□□□□□ -2.05
MKS1Q9NXB0 MIR4724-201ENST00000579485 89 ntBASIC2.24□□□□□ -2.05
MKS1Q9NXB0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.24□□□□□ -2.05
MKS1Q9NXB0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.23□□□□□ -2.05
MKS1Q9NXB0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
MKS1Q9NXB0 MIR367-201ENST00000362299 68 ntBASIC2.23□□□□□ -2.05
MKS1Q9NXB0 MIR626-201ENST00000385032 94 ntBASIC2.23□□□□□ -2.05
MKS1Q9NXB0 RN7SKP200-201ENST00000410564 320 ntBASIC2.23□□□□□ -2.05
MKS1Q9NXB0 RNU6-383P-201ENST00000410864 94 ntBASIC2.23□□□□□ -2.05
MKS1Q9NXB0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.23□□□□□ -2.05
MKS1Q9NXB0 AC244636.1-201ENST00000421152 228 ntBASIC2.23□□□□□ -2.05
MKS1Q9NXB0 AC108059.2-201ENST00000434626 151 ntBASIC2.23□□□□□ -2.05
MKS1Q9NXB0 RNU7-28P-201ENST00000516759 62 ntBASIC2.23□□□□□ -2.05
MKS1Q9NXB0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.23□□□□□ -2.05
MKS1Q9NXB0 AC021269.2-201ENST00000532318 330 ntBASIC2.23□□□□□ -2.05
MKS1Q9NXB0 MIR5002-201ENST00000584713 97 ntBASIC2.23□□□□□ -2.05
MKS1Q9NXB0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
MKS1Q9NXB0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
MKS1Q9NXB0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
MKS1Q9NXB0 Y_RNA.83-201ENST00000363005 113 ntBASIC2.22□□□□□ -2.05
MKS1Q9NXB0 Y_RNA.253-201ENST00000364562 112 ntBASIC2.22□□□□□ -2.05
MKS1Q9NXB0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.22□□□□□ -2.05
MKS1Q9NXB0 MIR634-201ENST00000385208 97 ntBASIC2.22□□□□□ -2.05
MKS1Q9NXB0 snoU13.27-201ENST00000459278 104 ntBASIC2.22□□□□□ -2.05
MKS1Q9NXB0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.22□□□□□ -2.05
MKS1Q9NXB0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.22□□□□□ -2.05
MKS1Q9NXB0 MIR2681-201ENST00000581814 105 ntBASIC2.22□□□□□ -2.05
MKS1Q9NXB0 AL591926.4-201ENST00000616895 298 ntBASIC2.22□□□□□ -2.05
MKS1Q9NXB0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
MKS1Q9NXB0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MKS1Q9NXB0 MIR411-201ENST00000362239 96 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.24-201ENST00000362508 103 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 RNU4-41P-201ENST00000364426 143 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 Y_RNA.274-201ENST00000364714 101 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 RNU6-200P-201ENST00000364743 107 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 RNU6-969P-201ENST00000383900 105 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 MIR196B-201ENST00000384852 84 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 SNORA48.3-201ENST00000391081 134 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 RNA5SP482-201ENST00000391269 118 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 COX6CP10-201ENST00000416832 224 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 STAG3L5P-204ENST00000443759 179 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 RPL23AP6-201ENST00000446637 472 ntBASIC2.21□□□□□ -2.06
MKS1Q9NXB0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.21□□□□□ -2.06
MKS1Q9NXB0 HMGN1P7-201ENST00000491722 313 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms